Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34913
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Citation: Martinez-Carranza, M.; Vialle, L.; Madru, C.; Cordier, F.; Dizkirici Tekpinar, A.; Haouz, A.; Legrand, P.; Le Meur, R.; England, P.; Dulermo, R.; Guijarro, J.; Henneke, G.; Sauguet, L.. "Communication between DNA polymerases and Replication Protein A within the archaeal replisome" .
Assembly members:
entity_1, polymer, 94 residues, 11006.380 Da.
Natural source: Common Name: Pyrococcus abyssi GE5 Taxonomy ID: 272844 Superkingdom: Archaea Kingdom: not available Genus/species: Pyrococcus abyssi
Experimental source: Production method: recombinant technology Host organism: Escherichia coli BL21(DE3)
Entity Sequences (FASTA):
entity_1: GTGGIMMEERSIEEPMEELL
EEEIPEEKEENELLEKAKED
ILNILRQKRTAISRKYILKK
LGDKYDEETIDDAITELLAQ
GEIYEPETGYYKLL
Data type | Count |
13C chemical shifts | 416 |
15N chemical shifts | 95 |
1H chemical shifts | 645 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | unit_1 | 1 |
Entity 1, unit_1 94 residues - 11006.380 Da.
1 | GLY | THR | GLY | GLY | ILE | MET | MET | GLU | GLU | ARG | ||||
2 | SER | ILE | GLU | GLU | PRO | MET | GLU | GLU | LEU | LEU | ||||
3 | GLU | GLU | GLU | ILE | PRO | GLU | GLU | LYS | GLU | GLU | ||||
4 | ASN | GLU | LEU | LEU | GLU | LYS | ALA | LYS | GLU | ASP | ||||
5 | ILE | LEU | ASN | ILE | LEU | ARG | GLN | LYS | ARG | THR | ||||
6 | ALA | ILE | SER | ARG | LYS | TYR | ILE | LEU | LYS | LYS | ||||
7 | LEU | GLY | ASP | LYS | TYR | ASP | GLU | GLU | THR | ILE | ||||
8 | ASP | ASP | ALA | ILE | THR | GLU | LEU | LEU | ALA | GLN | ||||
9 | GLY | GLU | ILE | TYR | GLU | PRO | GLU | THR | GLY | TYR | ||||
10 | TYR | LYS | LEU | LEU |
sample_1: RPA2WH, [U-98% 13C; U-98% 15N], 300 uM; MES 20 mM; NaCl 150 mM
sample_conditions_1: ionic strength: 170 mM; pH: 6; pressure: 1 atm; temperature: 308.15 K
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
2D 1H-13C HSQC | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D HNCA | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D H(CCO)NH | sample_1 | isotropic | sample_conditions_1 |
3D C(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HN(CO)CA | sample_1 | isotropic | sample_conditions_1 |
3D HBHA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HCCH-TOCSY | sample_1 | isotropic | sample_conditions_1 |
3D HBHAN | sample_1 | isotropic | sample_conditions_1 |
3D 1H-13C NOESY aliphatic | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N TOCSY | sample_1 | isotropic | sample_conditions_1 |
2D CB(CGCD)HD | sample_1 | isotropic | sample_conditions_1 |
2D CB(CGCDCE)HE | sample_1 | isotropic | sample_conditions_1 |
TopSpin v4.1.3, Bruker Biospin - collection
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
CcpNmr Analysis v2.5.2, CCPN - chemical shift assignment
CcpNmr Analysis, CCPN - peak picking
CNS v1.2.1, Brunger, Adams, Clore, Gros, Nilges and Read - refinement, structure calculation
ARIA v2.3.2, Linge, O'Donoghue and Nilges - chemical shift calculation
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks