BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 6882

Title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for the extracellular sushi domain of the Interleukin-15 receptor   PubMed: 16377614

Deposition date: 2005-11-01 Original release date: 2006-04-24

Authors: Lorenzen, Inken; Dingley, Andrew; Groetzinger, Joachim

Citation: Lorenzen, Inken; Dingley, Andrew; Jaques, Yannick; Groetzinger, Joachim. "The structure of the IL-15alpha-receptor and its implications for ligand binding"  J. Biol. Chem. 281, 6642-6647 (2006).

Assembly members:
interleukin-15 receptor, polymer, 66 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Vector: pQE30

Entity Sequences (FASTA):
interleukin-15 receptor: ITCPPPMSVEHADIWVKSYS LYSRERYICNSGFKRKAGTS SLTECVLNKATNVAHWTTPS LKCIRD

Data sets:
Data typeCount
13C chemical shifts287
15N chemical shifts65
1H chemical shifts379

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1interleukin-15 receptor1

Entities:

Entity 1, interleukin-15 receptor 66 residues - Formula weight is not available

1   ILETHRCYSPROPROPROMETSERVALGLU
2   HISALAASPILETRPVALLYSSERTYRSER
3   LEUTYRSERARGGLUARGTYRILECYSASN
4   SERGLYPHELYSARGLYSALAGLYTHRSER
5   SERLEUTHRGLUCYSVALLEUASNLYSALA
6   THRASNVALALAHISTRPTHRTHRPROSER
7   LEULYSCYSILEARGASP

Samples:

sample_1: interleukin-15 receptor, [U-15N; U-13C], 1 mM; phosphate buffer 20 mM; NaCl 150 mM

conditions_1: pH: 7.4; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
HNCAsample_1not availableconditions_1
HC(CO)NHsample_1not availableconditions_1
(H)C(CO)NHsample_1not availableconditions_1
N15-edited NOESYsample_1not availableconditions_1
N15-edited TOCSYsample_1not availableconditions_1
13C-edit TOCSYsample_1not availableconditions_1
13C-edit NOESYsample_1not availableconditions_1
13C-edit NOESY (D2O)sample_1not availableconditions_1
H(N)COsample_1not availableconditions_1
3D-HNCOsample_1not availableconditions_1
1H15N HSQC (example)sample_1not availableconditions_1
C(CO)NHsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Bruker DRX 600 MHz
  • Varian INOVA 600 MHz

Related Database Links:

PDB
DBJ BAG65084
EMBL CAG33345 CAG46820
GB AAB88175 AAC50312 AAH74726 AAI07778 AAI21141
PRF 2205305A
REF NP_001230468 NP_001243694 NP_002180 NP_751950 XP_001145886
SP Q13261
AlphaFold Q13261

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts