BMRB Entry 30306
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR30306
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Title: Cytokine-like Stress Response Peptide-2 in Manduca Sexta PubMed: 27903232
Deposition date: 2017-06-14 Original release date: 2017-07-07
Authors: Schrag, L.; Herrera, A.; Prakash, O.
Citation: Schrag, L.; Cao, X.; Herrera, A.; Wang, Y.; Jiang, H.; Prakash, O.. "Solution Structure and Expression Profile of an Insect Cytokine: Manduca sexta Stress Response Peptide-2." Protein Pept. Lett. 24, 3-11 (2017).
Assembly members:
entity_1, polymer, 25 residues, 2758.163 Da.
Natural source: Common Name: tobacco hornworm Taxonomy ID: 7130 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Manduca sexta
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
entity_1: FGVKDGKCPSGRVRRLGICV
PDDDY
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 148 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | entity_1 | 1 |
Entities:
Entity 1, entity_1 25 residues - 2758.163 Da.
| 1 | PHE | GLY | VAL | LYS | ASP | GLY | LYS | CYS | PRO | SER | ||||
| 2 | GLY | ARG | VAL | ARG | ARG | LEU | GLY | ILE | CYS | VAL | ||||
| 3 | PRO | ASP | ASP | ASP | TYR |
Samples:
sample_1: Stress Response Peptide-2 2.0 mM
sample_conditions_1: pH: 2.5; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D DQF-COSY | sample_1 | anisotropic | sample_conditions_1 |
| 2D 1H-1H TOCSY | sample_1 | anisotropic | sample_conditions_1 |
| 2D 1H-1H NOESY | sample_1 | anisotropic | sample_conditions_1 |
Software:
CNS v1.3, Brunger A. T. et.al. - refinement, structure calculation
CcpNMR, CCPN - chemical shift assignment, peak picking
Procheck v3.4, Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton - refinement
VNMRJ v3.2, Varian - collection
NMR spectrometers:
- Varian VNMRS 500 MHz