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PDB ID: 2rq0
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR11062
MolProbity Validation Chart
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NMR-STAR v3 text file.
XML gzip file.
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Citation: Miyamoto, Yuya; Nishimura, Shigenori; Inoue, Katsuaki; Shimamoto, Shigeru; Yoshida, Takuya; Fukuhara, Ayano; Yamada, Mao; Urade, Yoshihiro; Yagi, Naoto; Ohkubo, Tadayasu; Inui, Takashi. "Structural analysis of lipocalin-type prostaglandin D synthase complexed
with biliverdin by small-angle X-ray scattering and multi-dimensional NMR" J. Struct. Biol. 169, 209-218 (2010).
PubMed: 19833210
Assembly members:
lipocalin-type prostaglandin D synthase, polymer, 167 residues, 18500 Da.
Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX-2T
Entity Sequences (FASTA):
lipocalin-type prostaglandin D synthase: GSQGHDTVQPNFQQDKFLGR
WYSAGLASNSSWFREKKAVL
YMAKTVVAPSTEGGLNLTST
FLRKNQCETKIMVLQPAGAP
GHYTYSSPHSGSIHSVSVVE
ANYDEYALLFSRGTKGPGQD
FRMATLYSRTQTLKDELKEK
FTTFSKAQGLTEEDIVFLPQ
PDKCIQE
Data type | Count |
13C chemical shifts | 465 |
15N chemical shifts | 165 |
1H chemical shifts | 841 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | lipocalin-type prostaglandin D synthase | 1 |
Entity 1, lipocalin-type prostaglandin D synthase 167 residues - 18500 Da.
1 | GLY | SER | GLN | GLY | HIS | ASP | THR | VAL | GLN | PRO | ||||
2 | ASN | PHE | GLN | GLN | ASP | LYS | PHE | LEU | GLY | ARG | ||||
3 | TRP | TYR | SER | ALA | GLY | LEU | ALA | SER | ASN | SER | ||||
4 | SER | TRP | PHE | ARG | GLU | LYS | LYS | ALA | VAL | LEU | ||||
5 | TYR | MET | ALA | LYS | THR | VAL | VAL | ALA | PRO | SER | ||||
6 | THR | GLU | GLY | GLY | LEU | ASN | LEU | THR | SER | THR | ||||
7 | PHE | LEU | ARG | LYS | ASN | GLN | CYS | GLU | THR | LYS | ||||
8 | ILE | MET | VAL | LEU | GLN | PRO | ALA | GLY | ALA | PRO | ||||
9 | GLY | HIS | TYR | THR | TYR | SER | SER | PRO | HIS | SER | ||||
10 | GLY | SER | ILE | HIS | SER | VAL | SER | VAL | VAL | GLU | ||||
11 | ALA | ASN | TYR | ASP | GLU | TYR | ALA | LEU | LEU | PHE | ||||
12 | SER | ARG | GLY | THR | LYS | GLY | PRO | GLY | GLN | ASP | ||||
13 | PHE | ARG | MET | ALA | THR | LEU | TYR | SER | ARG | THR | ||||
14 | GLN | THR | LEU | LYS | ASP | GLU | LEU | LYS | GLU | LYS | ||||
15 | PHE | THR | THR | PHE | SER | LYS | ALA | GLN | GLY | LEU | ||||
16 | THR | GLU | GLU | ASP | ILE | VAL | PHE | LEU | PRO | GLN | ||||
17 | PRO | ASP | LYS | CYS | ILE | GLN | GLU |
BMRB | 10137 18473 |
PDB | 2CZT 2CZU 2E4J 2KTD 2RQ0 |
DBJ | BAA74461 BAE20833 |
EMBL | CAA61506 CAA71226 |
GB | AAH38083 AAH43015 EDL08248 EDL08250 EDL08251 |
REF | NP_032989 XP_006497849 XP_006497850 |
SP | O09114 |
AlphaFold | O09114 |
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