BMRB Entry 11569

Title:
Chemical Shift Assignments for MIP and MDM2 in bound state
Deposition date:
2014-06-03
Original release date:
2015-06-02
Authors:
Nagata, Takashi; Shirakawa, Kie; Kobayashi, Naohiro; Shiheido, Hidekazu; Horisawa, Kenichi; Katahira, Masato; Doi, Nobuhide; Yanagawa, Hiroshi
Citation:

Citation: Nagata, Takashi; Shirakawa, Kie; Kobayashi, Naohiro; Shiheido, Hidekazu; Horisawa, Kenichi; Katahira, Masato; Doi, Nobuhide; Yanagawa, Hiroshi. "Structural Basis for Inhibition of the MDM2:p53 Interaction by an Optimized MDM2-Binding Peptide Selected with mRNA Display"  Plos One 9, e109163-e109163 (2014).
PubMed: 25275651

Assembly members:

Assembly members:
MIP-MDM2, polymer, 131 residues, 15031.517 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET15b

Data sets:
Data typeCount
13C chemical shifts575
15N chemical shifts115
1H chemical shifts863

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1entity1

Entities:

Entity 1, entity 131 residues - 15031.517 Da.

Residues -11Met to 1Glu corresponds to 0Met to 12Glu of MIP peptide, residues 2Gly to 10Gln represents TEV cleavage sequence, residues 11Gly to 108Met corresponds to MDM2, and residues M109 to 119Gly represents T7tag."

1   METPROARGPHETRPGLUTYRTRPLEUARG
2   LEUMETGLUGLYGLYGLYGLUASNLEUTYR
3   PHEGLNGLYMETSERVALPROTHRASPGLY
4   ALAVALTHRTHRSERGLNILEPROALASER
5   GLUGLNGLUTHRLEUVALARGPROLYSPRO
6   LEULEULEULYSLEULEULYSSERVALGLY
7   ALAGLNLYSASPTHRTYRTHRMETLYSGLU
8   VALLEUPHETYRLEUGLYGLNTYRILEMET
9   THRLYSARGLEUTYRASPGLULYSGLNGLN
10   HISILEVALTYRCYSSERASNASPLEULEU
11   GLYASPLEUPHEGLYVALPROSERPHESER
12   VALLYSGLUHISARGLYSILETYRTHRMET
13   METALASERMETTHRGLYGLYGLNGLNMET
14   GLY

Related Database Links:

BMRB 18755 18876 2410
PDB 1RV1 1T4E 1T4F 1YCR 1Z1M 2AXI 2GV2 2LZG 2M86 2MPS 2RUH 3EQS 3G03 3IUX 3IWY 3JZK 3JZR 3JZS 3LBK 3LBL 3LNJ 3LNZ 3TJ2 3TPX 3TU1 3V3B 3VBG 3VZV 3W69 4DIJ 4ERE 4ERF 4HBM 4JV7 4JV9 4JVE 4JVR 4JWR 4MDN 4MDQ 4OAS 4OBA 4OCC 4ODE 4ODF 4OGN 4OGT 4OGV 4OQ3 4QO4 4QOC 4UMN 4WT2 4ZYC 4ZYF 4ZYI
DBJ BAF83030 BAJ17752
EMBL CAA78055 CAD23251 CAD36959 CAH89564 CAP16708
GB AAA60568 AAI48523 AAI52385 AAI52391 AAI53118
PRF 1814460A
REF NP_001124685 NP_001138809 NP_001138811 NP_001253331 NP_002383
SP Q00987
AlphaFold Q00987

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks