BMRB Entry 15217

Name: NMR SOLUTION STRUCTURE OF YKVR PROTEIN FROM BACILLUS SUBTILIS: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR358
Published: 2007-05-02

Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR15217

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

NMR SOLUTION STRUCTURE OF YKVR PROTEIN FROM BACILLUS SUBTILIS: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR358

Deposition date:

2007-04-18

Original release date:

2007-05-02

Authors:

Swapna, G.; Chi Ho, K.; Cunningham, K.; Ma, L.; Xiao, R.; Baran, M.; Acton, T.; Liu, J.; Rost, B.; Montelione, G.

Citation:

Citation: Swapna, G.; Chi Ho, K.; Cunningham, K.; Ma, L.; Xiao, R.; Baran, M.; Acton, T.; Liu, J.; Rost, B.; Montelione, G.. "NMR Solution Structure of Ykvr Protein from Bacillus Subtilis: Northeast Structural Genomics Consortium Target SR358" .

Assembly members:

Assembly members:
YKVR_PROTEIN, polymer, 105 residues, 12246.754 Da.

Natural source:

Natural source: Common Name: Bacteria Taxonomy ID: 1423 Superkingdom: not available Kingdom: not available Genus/species: Bacillus subtilis

Experimental source:

Experimental source: Production method: recombinant technology Host organism: ESCHERICHIA COLI Vector: PET21

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YKVR_PROTEIN: MVKTLRLNNVTLEMAAYQEE SEPKRKIAFTLNVTSETYHD IAVLLYEKTFNVEVPERDLA FRGEMTNYSTSLTNLYEPGA VSEFYIEITEIDKNADSLEH HHHHH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	353
15N chemical shifts	101
1H chemical shifts	716

Time Domain Data

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	full length protein	1

Entities:

Entity 1, full length protein 105 residues - 12246.754 Da.

1

MET

VAL

LYS

THR

LEU

ARG

LEU

ASN

VAL

2

THR

LEU

GLU

MET

ALA

TYR

GLN

GLU

3

SER

GLU

PRO

LYS

ARG

LYS

ILE

ALA

PHE

THR

4

LEU

ASN

VAL

THR

SER

GLU

THR

TYR

HIS

ASP

5

ILE

ALA

VAL

LEU

TYR

GLU

LYS

THR

PHE

6

ASN

VAL

GLU

VAL

PRO

GLU

ARG

ASP

LEU

ALA

7

PHE

ARG

GLY

GLU

MET

THR

ASN

TYR

SER

THR

8

SER

LEU

THR

ASN

LEU

TYR

GLU

PRO

GLY

ALA

9

VAL

SER

GLU

PHE

TYR

ILE

GLU

ILE

THR

GLU

10

ILE

ASP

LYS

ASN

ALA

ASP

SER

LEU

GLU

HIS

11

HIS

Name	Sample	Sample state	Sample conditions
3D CBCA(CO)NH	sample_2	isotropic	sample_conditions_1
3D HNCACB	sample_2	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_2	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_2	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_2	isotropic	sample_conditions_1
3D HBHANH	sample_2	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_3	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY (aliph)	sample_3	isotropic	sample_conditions_1
3D HcccoNH-TOCSY	sample_2	isotropic	sample_conditions_1
3D CccoNH-TOCSY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY (arom)	sample_3	isotropic	sample_conditions_1

PDB	2JN9
DBJ	BAI84986 BAM52020 BAM57597
EMBL	CAB13253 CCU57937 CEI56537 CEJ76960 CJS27153
GB	ADV96396 AFQ57311 AGA22143 AGE63229 AGG60748
REF	NP_389263 WP_003245399 WP_015252208 WP_017695059 WP_024572583
SP	O31683
AlphaFold	O31683

BMRB Entry 15217

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: