BMRB Entry 15587

Name: 1H, 13C and 15N resonance assignment of Urm1 from Trypanosoma.brucei
Published: 2008-03-31

Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR15587

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N resonance assignment of Urm1 from Trypanosoma.brucei

Deposition date:

2007-12-11

Original release date:

2008-03-31

Authors:

Zhang, Wen; Ding, Husheng; Zhang, Jiahai; Tu, xiaoming

Citation:

Citation: Zhang, Wen; Ding, Husheng; Zhang, Jiahai; Tu, Xiaoming. "1H, 13C and 15N resonance assignment of Urm1 from Trypanosoma brucei" Biomol. NMR Assignments 2, 59-60 (2008).
PubMed: 19636925

Assembly members:

Assembly members:
ubiquitin-related_modifier, polymer, 110 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Trypanosoma brucei Taxonomy ID: 5691 Superkingdom: Eukaryota Kingdom: not available Genus/species: Trypanosoma brucei

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: PET-22b(+)

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ubiquitin-related_modifier: MSNHNHITVQFAGGCELLFA KQTSLQLDGVVPTGTNLNGL VQLLKTNYVKERPDLLVDQT GQTLRPGILVLVNSCDAEVV GGMDYVLNDGDTVEFISTLH GGLEHHHHHH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	397
15N chemical shifts	98
1H chemical shifts	617

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	subunit 1	1

Entities:

Entity 1, subunit 1 110 residues - Formula weight is not available

1	MET	SER	ASN	HIS	ASN	HIS	ILE	THR	VAL	GLN
2	PHE	ALA	GLY	GLY	CYS	GLU	LEU	LEU	PHE	ALA
3	LYS	GLN	THR	SER	LEU	GLN	LEU	ASP	GLY	VAL
4	VAL	PRO	THR	GLY	THR	ASN	LEU	ASN	GLY	LEU
5	VAL	GLN	LEU	LEU	LYS	THR	ASN	TYR	VAL	LYS
6	GLU	ARG	PRO	ASP	LEU	LEU	VAL	ASP	GLN	THR
7	GLY	GLN	THR	LEU	ARG	PRO	GLY	ILE	LEU	VAL
8	LEU	VAL	ASN	SER	CYS	ASP	ALA	GLU	VAL	VAL
9	GLY	GLY	MET	ASP	TYR	VAL	LEU	ASN	ASP	GLY
10	ASP	THR	VAL	GLU	PHE	ILE	SER	THR	LEU	HIS
11	GLY	GLY	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks

BMRB Entry 15587

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

1	MET	SER	ASN	HIS	ASN	HIS	ILE	THR	VAL	GLN
2	PHE	ALA	GLY	GLY	CYS	GLU	LEU	LEU	PHE	ALA
3	LYS	GLN	THR	SER	LEU	GLN	LEU	ASP	GLY	VAL
4	VAL	PRO	THR	GLY	THR	ASN	LEU	ASN	GLY	LEU
5	VAL	GLN	LEU	LEU	LYS	THR	ASN	TYR	VAL	LYS
6	GLU	ARG	PRO	ASP	LEU	LEU	VAL	ASP	GLN	THR
7	GLY	GLN	THR	LEU	ARG	PRO	GLY	ILE	LEU	VAL
8	LEU	VAL	ASN	SER	CYS	ASP	ALA	GLU	VAL	VAL
9	GLY	GLY	MET	ASP	TYR	VAL	LEU	ASN	ASP	GLY
10	ASP	THR	VAL	GLU	PHE	ILE	SER	THR	LEU	HIS
11	GLY	GLY	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

1	MET	SER	ASN	HIS	ASN	HIS	ILE	THR	VAL	GLN
2	PHE	ALA	GLY	GLY	CYS	GLU	LEU	LEU	PHE	ALA
3	LYS	GLN	THR	SER	LEU	GLN	LEU	ASP	GLY	VAL
4	VAL	PRO	THR	GLY	THR	ASN	LEU	ASN	GLY	LEU
5	VAL	GLN	LEU	LEU	LYS	THR	ASN	TYR	VAL	LYS
6	GLU	ARG	PRO	ASP	LEU	LEU	VAL	ASP	GLN	THR
7	GLY	GLN	THR	LEU	ARG	PRO	GLY	ILE	LEU	VAL
8	LEU	VAL	ASN	SER	CYS	ASP	ALA	GLU	VAL	VAL
9	GLY	GLY	MET	ASP	TYR	VAL	LEU	ASN	ASP	GLY
10	ASP	THR	VAL	GLU	PHE	ILE	SER	THR	LEU	HIS
11	GLY	GLY	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

1	MET	SER	ASN	HIS	ASN	HIS	ILE	THR	VAL	GLN
2	PHE	ALA	GLY	GLY	CYS	GLU	LEU	LEU	PHE	ALA
3	LYS	GLN	THR	SER	LEU	GLN	LEU	ASP	GLY	VAL
4	VAL	PRO	THR	GLY	THR	ASN	LEU	ASN	GLY	LEU
5	VAL	GLN	LEU	LEU	LYS	THR	ASN	TYR	VAL	LYS
6	GLU	ARG	PRO	ASP	LEU	LEU	VAL	ASP	GLN	THR
7	GLY	GLN	THR	LEU	ARG	PRO	GLY	ILE	LEU	VAL
8	LEU	VAL	ASN	SER	CYS	ASP	ALA	GLU	VAL	VAL
9	GLY	GLY	MET	ASP	TYR	VAL	LEU	ASN	ASP	GLY
10	ASP	THR	VAL	GLU	PHE	ILE	SER	THR	LEU	HIS
11	GLY	GLY	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS