BMRB Entry 17135
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17135
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Citation: Rawat, swati; Stemmler, Timothy. "Backbone Atom Chemical Shift Assignments for mature Drosophila Frataxin Homolog (Dfh)" J. Biomol. NMR ., .-..
Assembly members:
Drosophila_Frataxin_homolg, polymer, 133 residues, Formula weight is not available
Natural source: Common Name: fruit fly Taxonomy ID: 7227 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Drosophila melanogaster
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET101/TOPO
Entity Sequences (FASTA):
Drosophila_Frataxin_homolg: MSSQIETESTLDGATYERVC
SDTLDALCDYFEELTENASE
LQGTDVAYSDGVLTVNLGGQ
HGTYVINRQTPNKQIWLSSP
TSGPKRYDFVGTVAAGRWIY
KHSGQSLHELLQQEIPGILK
SQSVDFLRLPYCS
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 249 |
| 15N chemical shifts | 127 |
| 1H chemical shifts | 126 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Drosophila Frataxin Homolg | 1 |
Entities:
Entity 1, Drosophila Frataxin Homolg 133 residues - Formula weight is not available
After removing the mitochondrial targeting sequence that is initial 58 residues, tha mature protein starts with the 59-190 residues. We have assigned 128 out of 133 residues for mature Dfh.
| 1 | MET | SER | SER | GLN | ILE | GLU | THR | GLU | SER | THR | ||||
| 2 | LEU | ASP | GLY | ALA | THR | TYR | GLU | ARG | VAL | CYS | ||||
| 3 | SER | ASP | THR | LEU | ASP | ALA | LEU | CYS | ASP | TYR | ||||
| 4 | PHE | GLU | GLU | LEU | THR | GLU | ASN | ALA | SER | GLU | ||||
| 5 | LEU | GLN | GLY | THR | ASP | VAL | ALA | TYR | SER | ASP | ||||
| 6 | GLY | VAL | LEU | THR | VAL | ASN | LEU | GLY | GLY | GLN | ||||
| 7 | HIS | GLY | THR | TYR | VAL | ILE | ASN | ARG | GLN | THR | ||||
| 8 | PRO | ASN | LYS | GLN | ILE | TRP | LEU | SER | SER | PRO | ||||
| 9 | THR | SER | GLY | PRO | LYS | ARG | TYR | ASP | PHE | VAL | ||||
| 10 | GLY | THR | VAL | ALA | ALA | GLY | ARG | TRP | ILE | TYR | ||||
| 11 | LYS | HIS | SER | GLY | GLN | SER | LEU | HIS | GLU | LEU | ||||
| 12 | LEU | GLN | GLN | GLU | ILE | PRO | GLY | ILE | LEU | LYS | ||||
| 13 | SER | GLN | SER | VAL | ASP | PHE | LEU | ARG | LEU | PRO | ||||
| 14 | TYR | CYS | SER |
Related Database Links:
| EMBL | CAC20098 |
| GB | AAF46449 AAG35732 AAG35733 AAM11002 ACL87329 |
| REF | NP_511094 XP_002043984 XP_002106519 |
| SP | Q9W385 |
| AlphaFold | Q9W385 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks