BMRB Entry 18421

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18421

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Title:
Capsid protein from Equine Infectious Anemia Virus
Deposition date:
2012-04-24
Original release date:
2012-09-14
Authors:
Chen, Kang; Tjandra, Nico
Citation:

Citation: Chen, Kang; Piszczek, Grzegorz; Carter, Carol; Tjandra, Nico. "The maturational refolding of the -hairpin motif of equine infectious anemia virus capsid protein extends its helix 1 at capsid assembly locus."  J. Biol. Chem. 288, 1511-1520 (2013).
PubMed: 23184932

Assembly members:

Assembly members:
eiavCA, polymer, 230 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: equine infectious anemia virus   Taxonomy ID: 11665   Superkingdom: Viruses   Kingdom: not available   Genus/species: Lentivirus equine infectious anemia virus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET

Entity Sequences (FASTA):

Entity Sequences (FASTA):
eiavCA: PIMIDGAGNRNFRPLTPRGY TTWVNTIQTNGLLNEASQNL FGILSVDCTSEEMNAFLDVV PGQAGQKQILLDAIDKIADD WDNRHPLPNAPLVAPPQGPI PMTARFIRGLGVPRERQMEP AFDQFRQTYRQWIIEAMSEG IKVMIGKPKAQNIRQGAKEP YPEFVDRLLSQIKSEGHPQE ISKFLTDTLTIQNANEECRN AMRHLRPEDTLEEKMYACRD IGTTKQKMML

Data sets:
Data typeCount
13C chemical shifts588
15N chemical shifts185
1H chemical shifts188

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1eiavCA1

Entities:

Entity 1, eiavCA 230 residues - Formula weight is not available

1   PROILEMETILEASPGLYALAGLYASNARG
2   ASNPHEARGPROLEUTHRPROARGGLYTYR
3   THRTHRTRPVALASNTHRILEGLNTHRASN
4   GLYLEULEUASNGLUALASERGLNASNLEU
5   PHEGLYILELEUSERVALASPCYSTHRSER
6   GLUGLUMETASNALAPHELEUASPVALVAL
7   PROGLYGLNALAGLYGLNLYSGLNILELEU
8   LEUASPALAILEASPLYSILEALAASPASP
9   TRPASPASNARGHISPROLEUPROASNALA
10   PROLEUVALALAPROPROGLNGLYPROILE
11   PROMETTHRALAARGPHEILEARGGLYLEU
12   GLYVALPROARGGLUARGGLNMETGLUPRO
13   ALAPHEASPGLNPHEARGGLNTHRTYRARG
14   GLNTRPILEILEGLUALAMETSERGLUGLY
15   ILELYSVALMETILEGLYLYSPROLYSALA
16   GLNASNILEARGGLNGLYALALYSGLUPRO
17   TYRPROGLUPHEVALASPARGLEULEUSER
18   GLNILELYSSERGLUGLYHISPROGLNGLU
19   ILESERLYSPHELEUTHRASPTHRLEUTHR
20   ILEGLNASNALAASNGLUGLUCYSARGASN
21   ALAMETARGHISLEUARGPROGLUASPTHR
22   LEUGLUGLULYSMETTYRALACYSARGASP
23   ILEGLYTHRTHRLYSGLNLYSMETMETLEU

Related Database Links:

BMRB 18815
PDB 1EIA 2EIA
DBJ BAB12103 BAB12109
GB AAA43003 AAA43010 AAA43011 AAB59861 AAC03760
REF NP_056901
SP P69730 P69731 P69732
AlphaFold P69730 P69731 P69732

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks