BMRB Entry 19008

Name: Chemical Shift Assignments for SinR from Bacillus subtilis
Published: 2013-03-13

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19008

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Chemical Shift Assignments for SinR from Bacillus subtilis

Deposition date:

2013-02-05

Original release date:

2013-03-13

Authors:

Stowe, Sean; Olson, Andrew; Cavanagh, John

Citation:

Citation: Stowe, Sean; Olson, Andrew; Losick, Richard; Cavanagh, John. "Chemical shift assignments and secondary structure prediction of the master biofilm regulator, SinR, from Bacillus subtilis." Biomol. NMR Assignments 8, 155-158 (2014).
PubMed: 23475644

Assembly members:

Assembly members:
SinR_FL, polymer, 111 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Firmicutes Taxonomy ID: 1423 Superkingdom: Bacteria Kingdom: not available Genus/species: Bacillus subtilis

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET22b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SinR_FL: MIGQRIKQYRKEKGYSLSEL AEKAGVAKSYLSSIERNLQT NPSIQFLEKVSAVLDVSVHT LLDEKHETEYDGQLDSEWEK LVRDAMTSGVSKKQFREFLD YQKWRKSQKEE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	489
15N chemical shifts	117
1H chemical shifts	602

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SinR_FL_1	1
2	SinR_FL_2	1
3	SinR_FL_3	1
4	SinR_FL_4	1

Entities:

Entity 1, SinR_FL_1 111 residues - Formula weight is not available

1

MET

ILE

GLY

GLN

ARG

ILE

LYS

GLN

TYR

ARG

2

LYS

GLU

LYS

GLY

TYR

SER

LEU

SER

GLU

LEU

3

ALA

GLU

LYS

ALA

GLY

VAL

ALA

LYS

SER

TYR

4

LEU

SER

ILE

GLU

ARG

ASN

LEU

GLN

THR

5

ASN

PRO

SER

ILE

GLN

PHE

LEU

GLU

LYS

VAL

6

SER

ALA

VAL

LEU

ASP

VAL

SER

VAL

HIS

THR

7

LEU

ASP

GLU

LYS

HIS

GLU

THR

GLU

TYR

8

ASP

GLY

GLN

LEU

ASP

SER

GLU

TRP

GLU

LYS

9

LEU

VAL

ARG

ASP

ALA

MET

THR

SER

GLY

VAL

10

SER

LYS

GLN

PHE

ARG

GLU

PHE

LEU

ASP

11

TYR

GLN

LYS

TRP

ARG

LYS

SER

GLN

LYS

GLU

12

GLU

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
2D 1H-15N TROSY-HSQC	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aromatic	sample_2	isotropic	sample_conditions_1

PDB	1B0N 3QQ6 3ZKC
DBJ	BAA12542 BAI85980 BAM52946 BAM58520 GAK78309
EMBL	CAB14392 CBI43490 CCF05840 CCG50467 CCP22253
GB	AAA22757 ABS74654 ADM38475 ADP33055 ADV93205
REF	NP_390341 WP_003226345 WP_003230185 WP_010789193 WP_013352861
SP	P06533
AlphaFold	P06533

BMRB Entry 19008

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: