BMRB Entry 27158

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PDB ID: 7p27
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR27158
MolProbity Validation Chart

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Title:
NMR study of non-structural proteins part III: 1H, 13C, 15N resonance assignment of macro domain from Chikungunya virus (CHIKV)
Deposition date:
2017-06-22
Original release date:
2017-09-29
Authors:
Lykouras, Michail; Tsika, Aikaterini; Lichiere, Julie; Papageorgiou, Nicolas; Coutard, Bruno; Bentrop, Detlef; Spyroulias, Georgios
Citation:

Citation: Lykouras, Michail; Tsika, Aikaterini; Lichiere, Julie; Papageorgiou, Nicolas; Coutard, Bruno; Bentrop, Detlef; Spyroulias, Georgios. "NMR study of non-structural proteins-part III: 1H, 13C, 15N backbone and side-chain resonance assignment of macro domain from Chikungunya virus (CHIKV)"  Biomol. NMR Assignments 12, 31-35 (2018).
PubMed: 28875416

Assembly members:

Assembly members:
CHIKV_macro_domain, polymer, 168 residues, 18605.07 Da.

Natural source:

Natural source:   Common Name: Chikungunya virus strain S27-African prototype   Taxonomy ID: 371094   Superkingdom: Viruses   Kingdom: not available   Genus/species: Alphavirus Chikungunya virus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pDest 14

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CHIKV_macro_domain: MKHHHHHHAPSYRVKRMDIA KNDEECVVNAANPRGLPGDG VCKAVYKKWPESFKNSATPV GTAKTVMCGTYPVIHAVGPN FSNYSESEGDRELAAAYREV AKEVTRLGVNSVAIPLLSTG VYSGGKDRLTQSLNHLFTAM DSTDADVVIYCRDKEWEKKI SEAIQMRT

Data sets:
Data typeCount
13C chemical shifts604
15N chemical shifts137
1H chemical shifts929

Additional metadata:

  • Assembly
  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1CHIKV macro domain1

Entities:

Entity 1, CHIKV macro domain 168 residues - 18605.07 Da.

1   METLYSHISHISHISHISHISHISALAPRO
2   SERTYRARGVALLYSARGMETASPILEALA
3   LYSASNASPGLUGLUCYSVALVALASNALA
4   ALAASNPROARGGLYLEUPROGLYASPGLY
5   VALCYSLYSALAVALTYRLYSLYSTRPPRO
6   GLUSERPHELYSASNSERALATHRPROVAL
7   GLYTHRALALYSTHRVALMETCYSGLYTHR
8   TYRPROVALILEHISALAVALGLYPROASN
9   PHESERASNTYRSERGLUSERGLUGLYASP
10   ARGGLULEUALAALAALATYRARGGLUVAL
11   ALALYSGLUVALTHRARGLEUGLYVALASN
12   SERVALALAILEPROLEULEUSERTHRGLY
13   VALTYRSERGLYGLYLYSASPARGLEUTHR
14   GLNSERLEUASNHISLEUPHETHRALAMET
15   ASPSERTHRASPALAASPVALVALILETYR
16   CYSARGASPLYSGLUTRPGLULYSLYSILE
17   SERGLUALAILEGLNMETARGTHR

Related Database Links:

UNP Q8JUX6
AlphaFold Q8JUX6

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks