BMRB Entry 27387

Name: NMR 1H,13C,15N resonance assignment of the G12C mutant of human K-Ras bound to GDP
Published: 2018-05-08

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR27387

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR 1H,13C,15N resonance assignment of the G12C mutant of human K-Ras bound to GDP

Deposition date:

2018-01-24

Original release date:

2018-05-08

Authors:

Sharma, Alok; Lee, Seung-Joo; Rigby, Alan; Townson, Sharon

Citation:

Citation: Sharma, Alok; Lee, Seung-Joo; Rigby, Alan; Townson, Sharon. "NMR 1H,13C, 15N backbone and 13C side chain resonance assignment of the G12C mutant of human K-Ras bound to GDP" Biomol. NMR Assignments 12, 269-272 (2018).
PubMed: 29721757

Assembly members:

Assembly members:
Ras_family_protein, polymer, 170 residues, Formula weight is not available
GUANOSINE-5'-DIPHOSPHATE, non-polymer, 443.201 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Ras_family_protein: SMTEYKLVVVGACGVGKSAL TIQLIQNHFVDEYDPTIEDS YRKQVVIDGETCLLDILDTA GQEEYSAMRDQYMRTGEGFL CVFAINNTKSFEDIHHYREQ IKRVKDSEDVPMVLVGNKCD LPSRTVDTKQAQDLARSYGI PFIETSAKTRQGVDDAFYTL VREIRKHKEK

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	646
15N chemical shifts	164
1H chemical shifts	164

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	GTPase KRAS	1
2	GDP	2

Entities:

Entity 1, GTPase KRAS 170 residues - Formula weight is not available

1	SER	MET	THR	GLU	TYR	LYS	LEU	VAL	VAL	VAL
2	GLY	ALA	CYS	GLY	VAL	GLY	LYS	SER	ALA	LEU
3	THR	ILE	GLN	LEU	ILE	GLN	ASN	HIS	PHE	VAL
4	ASP	GLU	TYR	ASP	PRO	THR	ILE	GLU	ASP	SER
5	TYR	ARG	LYS	GLN	VAL	VAL	ILE	ASP	GLY	GLU
6	THR	CYS	LEU	LEU	ASP	ILE	LEU	ASP	THR	ALA
7	GLY	GLN	GLU	GLU	TYR	SER	ALA	MET	ARG	ASP
8	GLN	TYR	MET	ARG	THR	GLY	GLU	GLY	PHE	LEU
9	CYS	VAL	PHE	ALA	ILE	ASN	ASN	THR	LYS	SER
10	PHE	GLU	ASP	ILE	HIS	HIS	TYR	ARG	GLU	GLN
11	ILE	LYS	ARG	VAL	LYS	ASP	SER	GLU	ASP	VAL
12	PRO	MET	VAL	LEU	VAL	GLY	ASN	LYS	CYS	ASP
13	LEU	PRO	SER	ARG	THR	VAL	ASP	THR	LYS	GLN
14	ALA	GLN	ASP	LEU	ALA	ARG	SER	TYR	GLY	ILE
15	PRO	PHE	ILE	GLU	THR	SER	ALA	LYS	THR	ARG
16	GLN	GLY	VAL	ASP	ASP	ALA	PHE	TYR	THR	LEU
17	VAL	ARG	GLU	ILE	ARG	LYS	HIS	LYS	GLU	LYS

Entity 2, GDP - C10 H15 N5 O11 P2 - 443.201 Da.

1

GDP

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
HN(CA)CO	sample_1	isotropic	sample_conditions_1

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks

BMRB Entry 27387

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

1	SER	MET	THR	GLU	TYR	LYS	LEU	VAL	VAL	VAL
2	GLY	ALA	CYS	GLY	VAL	GLY	LYS	SER	ALA	LEU
3	THR	ILE	GLN	LEU	ILE	GLN	ASN	HIS	PHE	VAL
4	ASP	GLU	TYR	ASP	PRO	THR	ILE	GLU	ASP	SER
5	TYR	ARG	LYS	GLN	VAL	VAL	ILE	ASP	GLY	GLU
6	THR	CYS	LEU	LEU	ASP	ILE	LEU	ASP	THR	ALA
7	GLY	GLN	GLU	GLU	TYR	SER	ALA	MET	ARG	ASP
8	GLN	TYR	MET	ARG	THR	GLY	GLU	GLY	PHE	LEU
9	CYS	VAL	PHE	ALA	ILE	ASN	ASN	THR	LYS	SER
10	PHE	GLU	ASP	ILE	HIS	HIS	TYR	ARG	GLU	GLN
11	ILE	LYS	ARG	VAL	LYS	ASP	SER	GLU	ASP	VAL
12	PRO	MET	VAL	LEU	VAL	GLY	ASN	LYS	CYS	ASP
13	LEU	PRO	SER	ARG	THR	VAL	ASP	THR	LYS	GLN
14	ALA	GLN	ASP	LEU	ALA	ARG	SER	TYR	GLY	ILE
15	PRO	PHE	ILE	GLU	THR	SER	ALA	LYS	THR	ARG
16	GLN	GLY	VAL	ASP	ASP	ALA	PHE	TYR	THR	LEU
17	VAL	ARG	GLU	ILE	ARG	LYS	HIS	LYS	GLU	LYS

1	SER	MET	THR	GLU	TYR	LYS	LEU	VAL	VAL	VAL
2	GLY	ALA	CYS	GLY	VAL	GLY	LYS	SER	ALA	LEU
3	THR	ILE	GLN	LEU	ILE	GLN	ASN	HIS	PHE	VAL
4	ASP	GLU	TYR	ASP	PRO	THR	ILE	GLU	ASP	SER
5	TYR	ARG	LYS	GLN	VAL	VAL	ILE	ASP	GLY	GLU
6	THR	CYS	LEU	LEU	ASP	ILE	LEU	ASP	THR	ALA
7	GLY	GLN	GLU	GLU	TYR	SER	ALA	MET	ARG	ASP
8	GLN	TYR	MET	ARG	THR	GLY	GLU	GLY	PHE	LEU
9	CYS	VAL	PHE	ALA	ILE	ASN	ASN	THR	LYS	SER
10	PHE	GLU	ASP	ILE	HIS	HIS	TYR	ARG	GLU	GLN
11	ILE	LYS	ARG	VAL	LYS	ASP	SER	GLU	ASP	VAL
12	PRO	MET	VAL	LEU	VAL	GLY	ASN	LYS	CYS	ASP
13	LEU	PRO	SER	ARG	THR	VAL	ASP	THR	LYS	GLN
14	ALA	GLN	ASP	LEU	ALA	ARG	SER	TYR	GLY	ILE
15	PRO	PHE	ILE	GLU	THR	SER	ALA	LYS	THR	ARG
16	GLN	GLY	VAL	ASP	ASP	ALA	PHE	TYR	THR	LEU
17	VAL	ARG	GLU	ILE	ARG	LYS	HIS	LYS	GLU	LYS

1	SER	MET	THR	GLU	TYR	LYS	LEU	VAL	VAL	VAL
2	GLY	ALA	CYS	GLY	VAL	GLY	LYS	SER	ALA	LEU
3	THR	ILE	GLN	LEU	ILE	GLN	ASN	HIS	PHE	VAL
4	ASP	GLU	TYR	ASP	PRO	THR	ILE	GLU	ASP	SER
5	TYR	ARG	LYS	GLN	VAL	VAL	ILE	ASP	GLY	GLU
6	THR	CYS	LEU	LEU	ASP	ILE	LEU	ASP	THR	ALA
7	GLY	GLN	GLU	GLU	TYR	SER	ALA	MET	ARG	ASP
8	GLN	TYR	MET	ARG	THR	GLY	GLU	GLY	PHE	LEU
9	CYS	VAL	PHE	ALA	ILE	ASN	ASN	THR	LYS	SER
10	PHE	GLU	ASP	ILE	HIS	HIS	TYR	ARG	GLU	GLN
11	ILE	LYS	ARG	VAL	LYS	ASP	SER	GLU	ASP	VAL
12	PRO	MET	VAL	LEU	VAL	GLY	ASN	LYS	CYS	ASP
13	LEU	PRO	SER	ARG	THR	VAL	ASP	THR	LYS	GLN
14	ALA	GLN	ASP	LEU	ALA	ARG	SER	TYR	GLY	ILE
15	PRO	PHE	ILE	GLU	THR	SER	ALA	LYS	THR	ARG
16	GLN	GLY	VAL	ASP	ASP	ALA	PHE	TYR	THR	LEU
17	VAL	ARG	GLU	ILE	ARG	LYS	HIS	LYS	GLU	LYS