BMRB Entry 36068

Name: Vaccatide: Antifungal Glutamine-rich 8C-Hevein-like Peptide, vH1
Published: 2018-07-10

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PDB ID: 5xdi
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR36068
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Vaccatide: Antifungal Glutamine-rich 8C-Hevein-like Peptide, vH1

Deposition date:

2017-03-28

Original release date:

2018-07-10

Authors:

Xiao, T.; Tam, J.

Citation:

Citation: Wong, K.; Tan, W.; Kini, S.; Xiao, T.; Serra, A.; Sze, S.; Tam, J.. "Vaccatides: Antifungal Glutamine-Rich Hevein-Like Peptides from Vaccaria hispanica" Front Plant Sci. 8, 1100-1100 (2017).
PubMed: 28680440

Assembly members:

Assembly members:
Vaccatide, vH1, polymer, 40 residues, 4087.565 Da.

Natural source:

Natural source: Common Name: Vaccaria hispanica Taxonomy ID: 39387 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Vaccaria hispanica

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Vaccatide, vH1: FQCGRQAGGARCSNGLCCSQ FGYCGSTPPYCGAGQCQSQC

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
1H chemical shifts	204

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity_1	1

Entities:

Entity 1, entity_1 40 residues - 4087.565 Da.

1	PHE	GLN	CYS	GLY	ARG	GLN	ALA	GLY	GLY	ALA
2	ARG	CYS	SER	ASN	GLY	LEU	CYS	CYS	SER	GLN
3	PHE	GLY	TYR	CYS	GLY	SER	THR	PRO	PRO	TYR
4	CYS	GLY	ALA	GLY	GLN	CYS	GLN	SER	GLN	CYS

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

BMRB Entry 36068

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

1	PHE	GLN	CYS	GLY	ARG	GLN	ALA	GLY	GLY	ALA
2	ARG	CYS	SER	ASN	GLY	LEU	CYS	CYS	SER	GLN
3	PHE	GLY	TYR	CYS	GLY	SER	THR	PRO	PRO	TYR
4	CYS	GLY	ALA	GLY	GLN	CYS	GLN	SER	GLN	CYS

1	PHE	GLN	CYS	GLY	ARG	GLN	ALA	GLY	GLY	ALA
2	ARG	CYS	SER	ASN	GLY	LEU	CYS	CYS	SER	GLN
3	PHE	GLY	TYR	CYS	GLY	SER	THR	PRO	PRO	TYR
4	CYS	GLY	ALA	GLY	GLN	CYS	GLN	SER	GLN	CYS

1	PHE	GLN	CYS	GLY	ARG	GLN	ALA	GLY	GLY	ALA
2	ARG	CYS	SER	ASN	GLY	LEU	CYS	CYS	SER	GLN
3	PHE	GLY	TYR	CYS	GLY	SER	THR	PRO	PRO	TYR
4	CYS	GLY	ALA	GLY	GLN	CYS	GLN	SER	GLN	CYS