BMRB Entry 5219
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5219
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Citation: Buchko, Garry; Wallace, Susan; Kennedy, Michael. "Letter to the Editor: Base excision repair: NMR backbone assignments of
Escherichia coli formamidopyrimidine-DNA glycosylase " J. Biomol. NMR 22, 301-302 (2002).
PubMed: 11991361
Assembly members:
E. coli formamidopyrimidine DNA glycosylase, polymer, 269 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.
Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET-11d
Entity Sequences (FASTA):
E. coli formamidopyrimidine DNA glycosylase: MPELPEVETSRRGIEPHLVG
ATILHAVVRNGRLRWPVSEE
IYRLSDQPVLSVQRRAKYLL
LELPEGWIIIHLGMSGSLRI
LPEELPPEKHDHVDLVMSNG
KVLRYTDPRRFGAWLWTKEL
EGHNVLTHLGPEPLSDDFNG
EYLHQKCAKKKTAIKPWLMD
NKLVVGVGNIYASESLFAAG
IHPDRLASSLSLAECELLAR
VIKAVLLRSIEQGGTTLKDF
LQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIVATKHAQRA
TFYCRQCQK
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 180 |
| 13C chemical shifts | 533 |
| 15N chemical shifts | 180 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Fpg | 1 |
| 2 | Zinc ion(II) | 2 |
Entities:
Entity 1, Fpg 269 residues - Formula weight is not available
| 1 | MET | PRO | GLU | LEU | PRO | GLU | VAL | GLU | THR | SER | ||||
| 2 | ARG | ARG | GLY | ILE | GLU | PRO | HIS | LEU | VAL | GLY | ||||
| 3 | ALA | THR | ILE | LEU | HIS | ALA | VAL | VAL | ARG | ASN | ||||
| 4 | GLY | ARG | LEU | ARG | TRP | PRO | VAL | SER | GLU | GLU | ||||
| 5 | ILE | TYR | ARG | LEU | SER | ASP | GLN | PRO | VAL | LEU | ||||
| 6 | SER | VAL | GLN | ARG | ARG | ALA | LYS | TYR | LEU | LEU | ||||
| 7 | LEU | GLU | LEU | PRO | GLU | GLY | TRP | ILE | ILE | ILE | ||||
| 8 | HIS | LEU | GLY | MET | SER | GLY | SER | LEU | ARG | ILE | ||||
| 9 | LEU | PRO | GLU | GLU | LEU | PRO | PRO | GLU | LYS | HIS | ||||
| 10 | ASP | HIS | VAL | ASP | LEU | VAL | MET | SER | ASN | GLY | ||||
| 11 | LYS | VAL | LEU | ARG | TYR | THR | ASP | PRO | ARG | ARG | ||||
| 12 | PHE | GLY | ALA | TRP | LEU | TRP | THR | LYS | GLU | LEU | ||||
| 13 | GLU | GLY | HIS | ASN | VAL | LEU | THR | HIS | LEU | GLY | ||||
| 14 | PRO | GLU | PRO | LEU | SER | ASP | ASP | PHE | ASN | GLY | ||||
| 15 | GLU | TYR | LEU | HIS | GLN | LYS | CYS | ALA | LYS | LYS | ||||
| 16 | LYS | THR | ALA | ILE | LYS | PRO | TRP | LEU | MET | ASP | ||||
| 17 | ASN | LYS | LEU | VAL | VAL | GLY | VAL | GLY | ASN | ILE | ||||
| 18 | TYR | ALA | SER | GLU | SER | LEU | PHE | ALA | ALA | GLY | ||||
| 19 | ILE | HIS | PRO | ASP | ARG | LEU | ALA | SER | SER | LEU | ||||
| 20 | SER | LEU | ALA | GLU | CYS | GLU | LEU | LEU | ALA | ARG | ||||
| 21 | VAL | ILE | LYS | ALA | VAL | LEU | LEU | ARG | SER | ILE | ||||
| 22 | GLU | GLN | GLY | GLY | THR | THR | LEU | LYS | ASP | PHE | ||||
| 23 | LEU | GLN | SER | ASP | GLY | LYS | PRO | GLY | TYR | PHE | ||||
| 24 | ALA | GLN | GLU | LEU | GLN | VAL | TYR | GLY | ARG | LYS | ||||
| 25 | GLY | GLU | PRO | CYS | ARG | VAL | CYS | GLY | THR | PRO | ||||
| 26 | ILE | VAL | ALA | THR | LYS | HIS | ALA | GLN | ARG | ALA | ||||
| 27 | THR | PHE | TYR | CYS | ARG | GLN | CYS | GLN | LYS |
Entity 2, Zinc ion(II) - Zn - 65.409 Da.
| 1 | ZN |
Related Database Links:
| SWISS-PROT | P05523 B1IZF8 A8A697 A7ZTI6 A1AHG8 |
| REF | NP_709414 NP_418092 NP_312537 NP_290215 AP_004156 |
| GenBank | AAN45121 AAG58779 AAC76659 AAB18612 AAA61988 |
| EMBL | CAA29431 |
| DBJ | BAE77657 BAB37933 |
| PDB | 1K82 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks