BMRB Entry 5275
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PDB ID: 1kqr
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5275
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Dormitzer, P.; Sun, Z.-Y.; Wagner, G.; Harrison, S.. "The rhesus rotavirus VP4 sialic acid binding domain has a galectin fold with a
novel carbohydrate binding site" EMBO J. 21, 885-897 (2002).
PubMed: 11867517
Assembly members:
rotavirus VP4, polymer, 186 residues, 20876 Da.
Natural source: Common Name: rhesus rotavirus Taxonomy ID: 10969 Superkingdom: Viruses Kingdom: not available Genus/species: Rhesus rotavirus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX-VP8(46-231)
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 1030 |
| 13C chemical shifts | 573 |
| 15N chemical shifts | 168 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | sialic acid binding domain of rhesus rotavirus VP4 | 1 |
Entities:
Entity 1, sialic acid binding domain of rhesus rotavirus VP4 186 residues - 20876 Da.
| 1 | ALA | PRO | VAL | ASN | TRP | GLY | PRO | GLY | GLU | THR | ||||
| 2 | ASN | ASP | SER | THR | THR | VAL | GLU | PRO | VAL | LEU | ||||
| 3 | ASP | GLY | PRO | TYR | GLN | PRO | THR | THR | PHE | ASN | ||||
| 4 | PRO | PRO | VAL | ASP | TYR | TRP | MET | LEU | LEU | ALA | ||||
| 5 | PRO | THR | ALA | ALA | GLY | VAL | VAL | VAL | GLU | GLY | ||||
| 6 | THR | ASN | ASN | THR | ASP | ARG | TRP | LEU | ALA | THR | ||||
| 7 | ILE | LEU | VAL | GLU | PRO | ASN | VAL | THR | SER | GLU | ||||
| 8 | THR | ARG | SER | TYR | THR | LEU | PHE | GLY | THR | GLN | ||||
| 9 | GLU | GLN | ILE | THR | ILE | ALA | ASN | ALA | SER | GLN | ||||
| 10 | THR | GLN | TRP | LYS | PHE | ILE | ASP | VAL | VAL | LYS | ||||
| 11 | THR | THR | GLN | ASN | GLY | SER | TYR | SER | GLN | TYR | ||||
| 12 | GLY | PRO | LEU | GLN | SER | THR | PRO | LYS | LEU | TYR | ||||
| 13 | ALA | VAL | MET | LYS | HIS | ASN | GLY | LYS | ILE | TYR | ||||
| 14 | THR | TYR | ASN | GLY | GLU | THR | PRO | ASN | VAL | THR | ||||
| 15 | THR | LYS | TYR | TYR | SER | THR | THR | ASN | TYR | ASP | ||||
| 16 | SER | VAL | ASN | MET | THR | ALA | PHE | CYS | ASP | PHE | ||||
| 17 | TYR | ILE | ILE | PRO | ARG | GLU | GLU | GLU | SER | THR | ||||
| 18 | CYS | THR | GLU | TYR | ILE | ASN | ASN | GLY | LEU | PRO | ||||
| 19 | PRO | ILE | GLN | ASN | THR | ARG |
Related Database Links:
| PDB | 1KQR 1KRI 2P3I 2P3J 2P3K 3IYU 3TB0 |
| GB | AAA47345 AAK52093 AAQ22730 ACC94315 AEK32854 |
| SP | P12473 |
| AlphaFold | P12473 P12473 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks