BMRB Entry 5600

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5600

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Title:
Complete 1H,13C,15N assignments of zinc Clostridium pasteurianum rubredoxin
Deposition date:
2002-11-26
Original release date:
2003-05-14
Authors:
Bougault, Catherine; Eidsness, Marly; Prestegard, James
Citation:

Citation: Bougault, Catherine; Eidsness, Marly; Prestegard, James. "Hydrogen Bonds in Rubredoxins from Mesophilic and Hyperthermophilic Organisms"  Biochemistry 42, 4357-4372 (2003).
PubMed: 12693931

Assembly members:

Assembly members:
clostridium pasteurianum rubredoxin, polymer, 54 residues, 6461.58 Da.
clostridium pasteurianum rubredoxin, polymer, 54 residues, 6432.58 Da.
ZN, non-polymer, 65.409 Da.

Natural source:

Natural source:   Common Name: Clostridium pasteurianum   Taxonomy ID: 1501   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Clostridium pasteurianum

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pEt T7

Entity Sequences (FASTA):

Entity Sequences (FASTA):
clostridium pasteurianum rubredoxin: XKKYTCTVCGYIYNPEDGDP DNGVNPGTDFKDIPDDWVCP LCGVGKDQFEEVEE
clostridium pasteurianum rubredoxin: MKKYTCTVCGYIYNPEDGDP DNGVNPGTDFKDIPDDWVCP LCGVGKDQFEEVEE

Data sets:
Data typeCount
1H chemical shifts371
15N chemical shifts111
13C chemical shifts310
coupling constants108

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1fMetCpRdZn1
2Zn13
3MetCpRdZn2
4Zn23

Entities:

Entity 1, fMetCpRdZn 54 residues - 6461.58 Da.

1   FMELYSLYSTYRTHRCYSTHRVALCYSGLY
2   TYRILETYRASNPROGLUASPGLYASPPRO
3   ASPASNGLYVALASNPROGLYTHRASPPHE
4   LYSASPILEPROASPASPTRPVALCYSPRO
5   LEUCYSGLYVALGLYLYSASPGLNPHEGLU
6   GLUVALGLUGLU

Entity 3, Zn1 - Zn - 65.409 Da.

1   ZN

Entity 2, MetCpRdZn 54 residues - 6432.58 Da.

1   METLYSLYSTYRTHRCYSTHRVALCYSGLY
2   TYRILETYRASNPROGLUASPGLYASPPRO
3   ASPASNGLYVALASNPROGLYTHRASPPHE
4   LYSASPILEPROASPASPTRPVALCYSPRO
5   LEUCYSGLYVALGLYLYSASPGLNPHEGLU
6   GLUVALGLUGLU

Related Database Links:

BMRB 4050 4051 4066 4137 4182 4319 4320 6659 6660 6661 6662 6663 6664 6667 6668 6669 6670 6673 6674 6675 6676 6677 6678 6659 4319 4320 4137 4182
PDB 1B13 1B2J 1BE7 1BFY 1C09 1FHH 1FHM 1IRN 1IRO 1R0F 1R0G 1R0H 1R0I 1R0J 1SMM 1SMU 1SMW 1T9O 1T9Q 4MBS
GB AAA23279 AJA49845 AJA53833 ELP57804 KER11884
REF WP_003447684
SP P00268
GenBank AAA23279.1
SWISS-PROT P00268
AlphaFold P00268

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks