BMRB Entry 5758

Click here to enlarge.

PDB ID: 1ovq
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5758
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
1H, 13C and 15N chemical shift assignments for YqgF
Deposition date:
2003-03-27
Original release date:
2003-10-16
Authors:
Liu, Dingjiang; Repaka, Prasanti; Taremi, Shane; Wyss, Daniel
Citation:

Citation: Liu, Dingjiang; Wang, Yu-sen; Wyss, Daniel. "Solution structure of the hypothetical protein YqgF from Escherichia coli reveals an RNAse H fold"  J. Biomol. NMR 27, 389-392 (2003).

Assembly members:

Assembly members:
YqgF, polymer, 147 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YqgF: RGSMADIGSMSGTLLAFDFG TKSIGVAVGQRITGTARPLP AIKAQDGTPDWNIIERLLKE WQPDEIIVGLPLNMDGTEQP LTARARKFANRIHGRFGVEV KLHDERLSTVEARSGLFEQG GYRALNKGKVDSASAVIILE SYFEQGY

Data sets:
Data typeCount
1H chemical shifts778
13C chemical shifts470
15N chemical shifts122

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1YqgF1

Entities:

Entity 1, YqgF 147 residues - Formula weight is not available

1   ARGGLYSERMETALAASPILEGLYSERMET
2   SERGLYTHRLEULEUALAPHEASPPHEGLY
3   THRLYSSERILEGLYVALALAVALGLYGLN
4   ARGILETHRGLYTHRALAARGPROLEUPRO
5   ALAILELYSALAGLNASPGLYTHRPROASP
6   TRPASNILEILEGLUARGLEULEULYSGLU
7   TRPGLNPROASPGLUILEILEVALGLYLEU
8   PROLEUASNMETASPGLYTHRGLUGLNPRO
9   LEUTHRALAARGALAARGLYSPHEALAASN
10   ARGILEHISGLYARGPHEGLYVALGLUVAL
11   LYSLEUHISASPGLUARGLEUSERTHRVAL
12   GLUALAARGSERGLYLEUPHEGLUGLNGLY
13   GLYTYRARGALALEUASNLYSGLYLYSVAL
14   ASPSERALASERALAVALILEILELEUGLU
15   SERTYRPHEGLUGLNGLYTYR

Related Database Links:

BMRB 5270
PDB 1NMN 1NU0 1OVQ
DBJ BAB37248 BAE77012 BAG78741 BAI27233 BAI32263
EMBL CAP77386 CAQ33259 CAQ90381 CAQ99897 CAR04466
GB AAA69116 AAC75986 AAG58080 AAN44421 AAN81983
REF NP_289521 NP_311852 NP_417424 NP_708714 NP_755410
SP A1AFD5 A7ZR72 A8A489 B1IT58 B1LDF8
AlphaFold A1AFD5 A7ZR72 A8A489 B1IT58 B1LDF8

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks