BMRB Entry 6015

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PDB ID: 2avg
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6015
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Sequence specific assignment of C1 domain of human cardiac myosin binding protein C

Deposition date:

2003-11-20

Original release date:

2004-07-06

Authors:

Ababou, Abdessamad; Pfuhl, Mark

Citation:

Citation: Ababou, Abdessamad; Zhou, Lihong; Gautel, Mathias; Pfuhl, Mark. "Letter to the Editor: Sequence specific assignment of domain C1 of the N-terminal myosin-binding site of human cardiac myosin binding protein C (MyBP-C)" J. Biomol. NMR 29, 431-432 (2004).
PubMed: 15213454

Assembly members:

Assembly members:
cC1 domain, polymer, 120 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
cC1 domain: MHHHHHHSSMDDPIGLFVMR PQDGEVTVGGSITFSARVAG ASLLKPPVVKWFKGKWVDLS SKVGQHLQLHDSYDRASKVY LFELHITDAQPAFTGGYRCE VSTKDKFDCSNFNLTVHEAM

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	626
13C chemical shifts	416
15N chemical shifts	109

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	cC1 monomer	1

Entities:

Entity 1, cC1 monomer 120 residues - Formula weight is not available

1	MET	HIS	HIS	HIS	HIS	HIS	HIS	SER	SER	MET
2	ASP	ASP	PRO	ILE	GLY	LEU	PHE	VAL	MET	ARG
3	PRO	GLN	ASP	GLY	GLU	VAL	THR	VAL	GLY	GLY
4	SER	ILE	THR	PHE	SER	ALA	ARG	VAL	ALA	GLY
5	ALA	SER	LEU	LEU	LYS	PRO	PRO	VAL	VAL	LYS
6	TRP	PHE	LYS	GLY	LYS	TRP	VAL	ASP	LEU	SER
7	SER	LYS	VAL	GLY	GLN	HIS	LEU	GLN	LEU	HIS
8	ASP	SER	TYR	ASP	ARG	ALA	SER	LYS	VAL	TYR
9	LEU	PHE	GLU	LEU	HIS	ILE	THR	ASP	ALA	GLN
10	PRO	ALA	PHE	THR	GLY	GLY	TYR	ARG	CYS	GLU
11	VAL	SER	THR	LYS	ASP	LYS	PHE	ASP	CYS	SER
12	ASN	PHE	ASN	LEU	THR	VAL	HIS	GLU	ALA	MET

PDB	2AVG 2V6H 3CX2
DBJ	BAF84258 BAG60177
EMBL	CAA58882 CAA71216
GB	AAC04620 AAI36544 AAI36547 AAI42686 AAI51212
REF	NP_000247 XP_002808117 XP_002821860 XP_003278987 XP_003815230
SP	Q14896
AlphaFold	Q14896

BMRB Entry 6015

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	HIS	HIS	HIS	HIS	HIS	HIS	SER	SER	MET
2	ASP	ASP	PRO	ILE	GLY	LEU	PHE	VAL	MET	ARG
3	PRO	GLN	ASP	GLY	GLU	VAL	THR	VAL	GLY	GLY
4	SER	ILE	THR	PHE	SER	ALA	ARG	VAL	ALA	GLY
5	ALA	SER	LEU	LEU	LYS	PRO	PRO	VAL	VAL	LYS
6	TRP	PHE	LYS	GLY	LYS	TRP	VAL	ASP	LEU	SER
7	SER	LYS	VAL	GLY	GLN	HIS	LEU	GLN	LEU	HIS
8	ASP	SER	TYR	ASP	ARG	ALA	SER	LYS	VAL	TYR
9	LEU	PHE	GLU	LEU	HIS	ILE	THR	ASP	ALA	GLN
10	PRO	ALA	PHE	THR	GLY	GLY	TYR	ARG	CYS	GLU
11	VAL	SER	THR	LYS	ASP	LYS	PHE	ASP	CYS	SER
12	ASN	PHE	ASN	LEU	THR	VAL	HIS	GLU	ALA	MET

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	not available	not available	not available
2D 1H-13C HSQC	not available	not available	not available
3D 1H-1H-15N NOESY	not available	not available	not available
3D 1H-1H-15N TOCSY	not available	not available	not available
3D 13C-1H-1H NOESY	not available	not available	not available
3D 1H-13C-1H HCCH-TOCSY	not available	not available	not available
3D 1H-13C-1H HCCH-COSY	not available	not available	not available
3D CBCANH	not available	not available	not available
3D CBCA(CO)NH	not available	not available	not available
3D HBHACBCANH	not available	not available	not available
3D HBHACBCA(CO)NH	not available	not available	not available
3D HNCO	not available	not available	not available
3D 13C-1H-1H TOCSY Aromatics	not available	not available	not available
3D 13C-1H-1H NOESY Aromatics	not available	not available	not available

1	MET	HIS	HIS	HIS	HIS	HIS	HIS	SER	SER	MET
2	ASP	ASP	PRO	ILE	GLY	LEU	PHE	VAL	MET	ARG
3	PRO	GLN	ASP	GLY	GLU	VAL	THR	VAL	GLY	GLY
4	SER	ILE	THR	PHE	SER	ALA	ARG	VAL	ALA	GLY
5	ALA	SER	LEU	LEU	LYS	PRO	PRO	VAL	VAL	LYS
6	TRP	PHE	LYS	GLY	LYS	TRP	VAL	ASP	LEU	SER
7	SER	LYS	VAL	GLY	GLN	HIS	LEU	GLN	LEU	HIS
8	ASP	SER	TYR	ASP	ARG	ALA	SER	LYS	VAL	TYR
9	LEU	PHE	GLU	LEU	HIS	ILE	THR	ASP	ALA	GLN
10	PRO	ALA	PHE	THR	GLY	GLY	TYR	ARG	CYS	GLU
11	VAL	SER	THR	LYS	ASP	LYS	PHE	ASP	CYS	SER
12	ASN	PHE	ASN	LEU	THR	VAL	HIS	GLU	ALA	MET

1	MET	HIS	HIS	HIS	HIS	HIS	HIS	SER	SER	MET
2	ASP	ASP	PRO	ILE	GLY	LEU	PHE	VAL	MET	ARG
3	PRO	GLN	ASP	GLY	GLU	VAL	THR	VAL	GLY	GLY
4	SER	ILE	THR	PHE	SER	ALA	ARG	VAL	ALA	GLY
5	ALA	SER	LEU	LEU	LYS	PRO	PRO	VAL	VAL	LYS
6	TRP	PHE	LYS	GLY	LYS	TRP	VAL	ASP	LEU	SER
7	SER	LYS	VAL	GLY	GLN	HIS	LEU	GLN	LEU	HIS
8	ASP	SER	TYR	ASP	ARG	ALA	SER	LYS	VAL	TYR
9	LEU	PHE	GLU	LEU	HIS	ILE	THR	ASP	ALA	GLN
10	PRO	ALA	PHE	THR	GLY	GLY	TYR	ARG	CYS	GLU
11	VAL	SER	THR	LYS	ASP	LYS	PHE	ASP	CYS	SER
12	ASN	PHE	ASN	LEU	THR	VAL	HIS	GLU	ALA	MET