BMRB Entry 6177

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PDB ID: 1sjr
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6177
MolProbity Validation Chart

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Title:
N-terminal Domain of the Polypyrimidine Tract Binding Protein Contains a New RRM Variant That Contributes to High-Affinity RNA Binding
Deposition date:
2004-04-14
Original release date:
2004-11-08
Authors:
Simpson, P.; Monie, T.; Szendroi, A.; Davydova, N.; Tyzack, J.; Conte, M.; Read, C.; Cary, P.; Svergun, D.; V Konarev, P.; V., Petoukhov M.; Curry, S.; Matthews, S.
Citation:

Citation: Simpson, P.; Monie, T.; Szendroi, A.; Davydova, N.; Tyzack, J.; Conte, M.; Read, C.; Cary, P.; Svergun, D.; Konarev, P.; Curry, S.; Matthews, S.. "Structure and RNA interactions of the N-terminal RRM domains of PTB"  Structure (Camb) 12, 1631-1643 (2004).
PubMed: 15341728

Assembly members:

Assembly members:
polypyrimidine tract binding protein 1 domain 2, polymer, 164 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
polypyrimidine tract binding protein 1 domain 2: MHHHHHHGSAQAALQAVNSV QSGNLALAASAAAVDAGMAM AGQSPVLRIIVENLFYPVTL DVLHQIFSKFGTVLKIITFT KNNQFQALLQYADPVSAQHA KLSLDGQNIYNACCTLRIDF SKLTSLNVKYNNDKSRDYTR PDLPSGDSQPSLDQTMAAAF GLSV

Data sets:
Data typeCount
1H chemical shifts776
13C chemical shifts489
15N chemical shifts115

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1PTB1-2 monomer1

Entities:

Entity 1, PTB1-2 monomer 164 residues - Formula weight is not available

1   METHISHISHISHISHISHISGLYSERALA
2   GLNALAALALEUGLNALAVALASNSERVAL
3   GLNSERGLYASNLEUALALEUALAALASER
4   ALAALAALAVALASPALAGLYMETALAMET
5   ALAGLYGLNSERPROVALLEUARGILEILE
6   VALGLUASNLEUPHETYRPROVALTHRLEU
7   ASPVALLEUHISGLNILEPHESERLYSPHE
8   GLYTHRVALLEULYSILEILETHRPHETHR
9   LYSASNASNGLNPHEGLNALALEULEUGLN
10   TYRALAASPPROVALSERALAGLNHISALA
11   LYSLEUSERLEUASPGLYGLNASNILETYR
12   ASNALACYSCYSTHRLEUARGILEASPPHE
13   SERLYSLEUTHRSERLEUASNVALLYSTYR
14   ASNASNASPLYSSERARGASPTYRTHRARG
15   PROASPLEUPROSERGLYASPSERGLNPRO
16   SERLEUASPGLNTHRMETALAALAALAPHE
17   GLYLEUSERVAL

Related Database Links:

BMRB 5409
PDB 1SJR 3ZZY 3ZZZ
DBJ BAB86943 BAC28230 BAC29560 BAC30837 BAC31665
EMBL CAA36321 CAA43056 CAA43202 CAA43203 CAA43973
GB AAC99798 AAH02397 AAH04383 AAH07472 AAH13694
REF NP_001070831 NP_001257986 NP_001269942 NP_001289713 NP_002810
SP P17225 P26599 Q00438 Q29099 Q8WN55
TPG DAA27468
AlphaFold P17225 P26599 Q00438 Q29099 Q8WN55

Download HSQC peak lists in one of the following formats:
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