BMRB Entry 6236

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PDB ID: 1tkn
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6236
MolProbity Validation Chart

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Title:
Backbone 1H, 13C, and 15N Chemical Shift Assignments for CAPPD*, an Independently Folded Extracellular Domain of Human Amyloid-beta Precursor Protein
Deposition date:
2004-06-11
Original release date:
2004-09-01
Authors:
Dulubova, Irina; Ho, Angela; Huryeva, Iryna; Sudhof, Thomas; Rizo, Josep
Citation:

Citation: Dulubova, Irina; Ho, Angela; Huryeva, Iryna; Sudhof, Thomas; Rizo, Josep. "Three-Dimensional Structure of an Independently Folded Extracellular Domain of Human Amyloid-beta Precursor Protein"  Biochemistry 43, 9583-9588 (2004).
PubMed: 15274612

Assembly members:

Assembly members:
Amyloid-beta Precursor Protein, polymer, 117 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: 9606   Taxonomy ID: Human   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo Sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Amyloid-beta Precursor Protein: RVEAMLNDRRRLALENYITA LQAVPPRPRHVFNMLKKYVR AEQKDRQHTLKHFEHVRMVD PKKAAQIRSQVMTHLRVIYE RMNQSLSLLYNVPAVAEEIQ DEVDELLQKEQNYSDDV

Data sets:
Data typeCount
1H chemical shifts897
13C chemical shifts545
15N chemical shifts129

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1APP fragment, CAPPD*1

Entities:

Entity 1, APP fragment, CAPPD* 117 residues - Formula weight is not available

1   ARGVALGLUALAMETLEUASNASPARGARG
2   ARGLEUALALEUGLUASNTYRILETHRALA
3   LEUGLNALAVALPROPROARGPROARGHIS
4   VALPHEASNMETLEULYSLYSTYRVALARG
5   ALAGLUGLNLYSASPARGGLNHISTHRLEU
6   LYSHISPHEGLUHISVALARGMETVALASP
7   PROLYSLYSALAALAGLNILEARGSERGLN
8   VALMETTHRHISLEUARGVALILETYRGLU
9   ARGMETASNGLNSERLEUSERLEULEUTYR
10   ASNVALPROALAVALALAGLUGLUILEGLN
11   ASPGLUVALASPGLULEULEUGLNLYSGLU
12   GLNASNTYRSERASPASPVAL

Related Database Links:

PDB 1TKN 3NYL 3UMH 3UMI 3UMK
DBJ BAA22264 BAA84580 BAC36369 BAD51938 BAE01907
EMBL CAA30050 CAA30488 CAA31830 CAA53090 CAA66230
GB AAA36829 AAA51722 AAA51726 AAA58727 AAB41502
PRF 1303338A 1403400A 1507304A 1507304B
REF NP_000475 NP_001006601 NP_001013036 NP_001070264 NP_001127014
SP P05067 P08592 P12023 P53601 P79307
TPG DAA33655
AlphaFold P05067 P08592 P12023 P53601 P79307

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks