BMRB Entry 6743

Name: 1H, 13C, 15N Chemical Shift Assignments for CcdA Conformer a, b, and c
Published: 2006-10-19

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PDB ID: 2adl
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR6743
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, 15N Chemical Shift Assignments for CcdA Conformer a, b, and c

Deposition date:

2005-07-22

Original release date:

2006-10-19

Authors:

Madl, Tobias; VanMelderen, Laurence; Oberer, Monika; Keller, Walter; Khatai, Leila; Zangger, Klaus

Citation:

Citation: Madl, Tobias; VanMelderen, Laurence; Mine, N.; Respondek, M.; Oberer, Monika; Keller, Walter; Khatai, Leila; Zangger, Klaus. "Structural Basis for Nucleic Acid and Toxin Recognition of the Bacterial Antitoxin CcdA" J. Mol. Biol. ., .-. (2006).
PubMed: 17007877

Assembly members:

Assembly members:
CcdA conformer, polymer, 72 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Escherichia coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: Not applicable Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CcdA conformer: MKQRITVTVDSDSYQLLKAY DVNISGLVSTTMQNEARRLR AERWKVENQEGMVEVARFIE MNGSFADENKDW

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	647
15N chemical shifts	177
1H chemical shifts	1055

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CcdA conformer a, chain 1	1
2	CcdA conformer a, chain 2	1
3	CcdA conformer b, chain 1	1
4	CcdA conformer b, chain 2	1
5	CcdA conformer c, chain 1	1
6	CcdA conformer c, chain 2	1

Entities:

Entity 1, CcdA conformer a, chain 1 72 residues - Formula weight is not available

1

MET

LYS

GLN

ARG

ILE

THR

VAL

THR

VAL

ASP

2

SER

ASP

SER

TYR

GLN

LEU

LYS

ALA

TYR

3

ASP

VAL

ASN

ILE

SER

GLY

LEU

VAL

SER

THR

4

THR

MET

GLN

ASN

GLU

ALA

ARG

LEU

ARG

5

ALA

GLU

ARG

TRP

LYS

VAL

GLU

ASN

GLN

GLU

6

GLY

MET

VAL

GLU

VAL

ALA

ARG

PHE

ILE

GLU

7

MET

ASN

GLY

SER

PHE

ALA

ASP

GLU

ASN

LYS

8

ASP

TRP

Name	Sample	Sample state	Sample conditions
2D NOESY	sample_1	not available	conditions_1
3D HNCACB	sample_1	not available	conditions_1
3D HNCA	sample_1	not available	conditions_1
3D HN(CO)CA	sample_1	not available	conditions_1
3D HN(CA)CO	sample_1	not available	conditions_1
3D HNHA	sample_1	not available	conditions_1
3D HNCO	sample_1	not available	conditions_1
15N-edited TOCSY-HSQC	sample_1	not available	conditions_1
3D HCCH-TOCSY	sample_1	not available	conditions_1
3D HCCH-TOCSY-NNH	sample_1	not available	conditions_1
3D CCH-TOCSY-NNH	sample_1	not available	conditions_1
15N-edited 3D NOESY-HSQC	sample_1	not available	conditions_1
13C-edited 3D NOESY-HSQC	sample_1	not available	conditions_1
15N,13C-edited, 15N,13C-filtered NOESY-HSQC	sample_1	not available	conditions_1

PDB	2ADL 2ADN 2H3A 2H3C
DBJ	BAA84908
EMBL	CAQ87273 CAS07543
GB	ABG29600 EDX27972 EFR18484 EGI89156 EHU03747
REF	NP_053135 WP_000813637 WP_001541935 WP_004989170 YP_001965472

BMRB Entry 6743

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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