BMRB Entry 6785
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6785
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Citation: Sakakura, Masayoshi; Takahashi, Hideo; Terasawa, Hiroaki; Takeuchi, Kou; Fujii, Ikuo; Shimada, Ichio. "Backbone Resonance Assignments for the Fv Fragment of Catalytic Antibody 6D9
Complexed with a Transition State Analogue" J. Biomol. NMR 33, 282-282 (2005).
PubMed: 16341758
Assembly members:
variable light chain, polymer, 115 residues, 12500 Da.
variable heavy chain, polymer, 134 residues, 14900 Da.
TSA, non-polymer, 228.199 Da.
Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
variable light chain: MELVMTQTPLSLPVSLGDQA
SISCRSSQTIVHSNGDTYLD
WFLQKPGQSPKLLIYKVSNR
FSGVPDRFSGSGSGTDFTLK
ISRVEAEDLGVYYCFQGSHV
PPTFGGGTKLEIKRA
variable heavy chain: MQVQLLESGGGLVKPGGSLK
LSCAASGFTFSNYAMSWVRQ
TPEKRLEWVVSISSGGSIYY
LDSVKGRFTVSRDNARNILY
LQMTSLRSEDTAMYFCARVS
HYDGSRDWYFDVWGAGTSVT
VSSAAALEHHHHHH
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 639 |
| 15N chemical shifts | 214 |
| 1H chemical shifts | 216 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | variable light chain | 1 |
| 2 | variable heavy chain | 2 |
| 3 | TSA | 3 |
Entities:
Entity 1, variable light chain 115 residues - 12500 Da.
| 1 | MET | GLU | LEU | VAL | MET | THR | GLN | THR | PRO | LEU | ||||
| 2 | SER | LEU | PRO | VAL | SER | LEU | GLY | ASP | GLN | ALA | ||||
| 3 | SER | ILE | SER | CYS | ARG | SER | SER | GLN | THR | ILE | ||||
| 4 | VAL | HIS | SER | ASN | GLY | ASP | THR | TYR | LEU | ASP | ||||
| 5 | TRP | PHE | LEU | GLN | LYS | PRO | GLY | GLN | SER | PRO | ||||
| 6 | LYS | LEU | LEU | ILE | TYR | LYS | VAL | SER | ASN | ARG | ||||
| 7 | PHE | SER | GLY | VAL | PRO | ASP | ARG | PHE | SER | GLY | ||||
| 8 | SER | GLY | SER | GLY | THR | ASP | PHE | THR | LEU | LYS | ||||
| 9 | ILE | SER | ARG | VAL | GLU | ALA | GLU | ASP | LEU | GLY | ||||
| 10 | VAL | TYR | TYR | CYS | PHE | GLN | GLY | SER | HIS | VAL | ||||
| 11 | PRO | PRO | THR | PHE | GLY | GLY | GLY | THR | LYS | LEU | ||||
| 12 | GLU | ILE | LYS | ARG | ALA |
Entity 2, variable heavy chain 134 residues - 14900 Da.
| 1 | MET | GLN | VAL | GLN | LEU | LEU | GLU | SER | GLY | GLY | ||||
| 2 | GLY | LEU | VAL | LYS | PRO | GLY | GLY | SER | LEU | LYS | ||||
| 3 | LEU | SER | CYS | ALA | ALA | SER | GLY | PHE | THR | PHE | ||||
| 4 | SER | ASN | TYR | ALA | MET | SER | TRP | VAL | ARG | GLN | ||||
| 5 | THR | PRO | GLU | LYS | ARG | LEU | GLU | TRP | VAL | VAL | ||||
| 6 | SER | ILE | SER | SER | GLY | GLY | SER | ILE | TYR | TYR | ||||
| 7 | LEU | ASP | SER | VAL | LYS | GLY | ARG | PHE | THR | VAL | ||||
| 8 | SER | ARG | ASP | ASN | ALA | ARG | ASN | ILE | LEU | TYR | ||||
| 9 | LEU | GLN | MET | THR | SER | LEU | ARG | SER | GLU | ASP | ||||
| 10 | THR | ALA | MET | TYR | PHE | CYS | ALA | ARG | VAL | SER | ||||
| 11 | HIS | TYR | ASP | GLY | SER | ARG | ASP | TRP | TYR | PHE | ||||
| 12 | ASP | VAL | TRP | GLY | ALA | GLY | THR | SER | VAL | THR | ||||
| 13 | VAL | SER | SER | ALA | ALA | ALA | LEU | GLU | HIS | HIS | ||||
| 14 | HIS | HIS | HIS | HIS |
Entity 3, TSA - C10 H12 O6 - 228.199 Da.
| 1 | TSA |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks