BMRB Entry 11244
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11244
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Title: Solution structure of the first SANT domain from human nuclear receptor corepressor 1
Deposition date: 2010-07-23 Original release date: 2011-08-03
Authors: Zhang, H.; Hayahsi, F.; Yokoyama, S.
Citation: Zhang, H.; Hayashi, F.; Yokoyama, S.. "Solution structure of the first SANT domain from human nuclear receptor corepressor 1" .
Assembly members:
Sant domain, polymer, 61 residues, Formula weight is not available
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: cell free synthesis Host organism: E. coli - cell free Vector: P061225-49
Entity Sequences (FASTA):
Sant domain: GSSGSSGDRQFMNVWTDHEK
EIFKDKFIQHPKNFGLIASY
LERKSVPDCVLYYYLTKKNE
N
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 273 |
| 15N chemical shifts | 59 |
| 1H chemical shifts | 416 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Sant domain | 1 |
Entities:
Entity 1, Sant domain 61 residues - Formula weight is not available
| 1 | GLY | SER | SER | GLY | SER | SER | GLY | ASP | ARG | GLN | ||||
| 2 | PHE | MET | ASN | VAL | TRP | THR | ASP | HIS | GLU | LYS | ||||
| 3 | GLU | ILE | PHE | LYS | ASP | LYS | PHE | ILE | GLN | HIS | ||||
| 4 | PRO | LYS | ASN | PHE | GLY | LEU | ILE | ALA | SER | TYR | ||||
| 5 | LEU | GLU | ARG | LYS | SER | VAL | PRO | ASP | CYS | VAL | ||||
| 6 | LEU | TYR | TYR | TYR | LEU | THR | LYS | LYS | ASN | GLU | ||||
| 7 | ASN |
Samples:
sample_1: Sant domain, [U-13C; U-15N], 1.14 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%
condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 293 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D 13C-separated NOESY | sample_1 | isotropic | condition_1 |
| 3D 15N-separated NOESY | sample_1 | isotropic | condition_1 |
Software:
VNMR v6.1C, Varian - collection
NMRPipe v20031121, Delaglio, F. - processing
NMRView v5.0.4, Johnson, B.A. - data analysis
Kujira v0.9818, Kobayashi, N. - data analysis
CYANA v2.0.17, Guntert, P. - refinement, structure solution
NMR spectrometers:
- Varian INOVA 800 MHz
Related Database Links:
| PDB | |
| GB | AAH26028 AAH26623 AAH29627 AAH50594 AAH56862 |
| REF | NP_001177367 NP_001258032 XP_003912439 XP_004042267 XP_004376019 |
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