BMRB Entry 15290

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PDB ID: 2jqq
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15290
MolProbity Validation Chart

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Title:
Solution structure of Saccharomyces cerevisiae conserved oligomeric Golgi subunit 2 protein (Cog2p)
Deposition date:
2007-06-06
Original release date:
2007-07-02
Authors:
Cavanaugh, Lorraine; Chen, Xiaocheng; Pelczer, Istvan; Rizo, Josep; Hughson, Frederick
Citation:

Citation: Cavanaugh, Lorraine; Chen, Xiaocheng; Richardson, Brian; Ungar, Daniel; Pelczer, Istvan; Rizo, Josep; Hughson, Frederick. "Structural analysis of Conserved Oligomeric Golgi complex subunit 2"  J. Biol. Chem. 282, 23418-23426 (2007).
PubMed: 17565980

Assembly members:

Assembly members:
Cog2p, polymer, 204 residues, 23454.13 Da.

Natural source:

Natural source:   Common Name: baker's yeast   Taxonomy ID: 4932   Superkingdom: Eukaryota   Kingdom: Fungi   Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pGEX-4T1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Cog2p: GSDSLIRDLSGLSQKMVQTL LEQIRSNYDDYLTFSNTYTD EENETLINLEKTQSDLQKFM TQLDHLIKDDISNTQEIIKD VLEYLKKLDEIYGSLRNHSQ LTEALSLGKRLSKSLHEMCG IEPLEEEICSGLIEQLYKLI TASRRILESCADSNSPYIHH LRNDYQDLLQEFQISLKILT EKCLENPSSLQNLSLTLVSI IKTA

Data sets:
Data typeCount
13C chemical shifts846
15N chemical shifts205
1H chemical shifts1395

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1Cog2p monomer1

Entities:

Entity 1, Cog2p monomer 204 residues - 23454.13 Da.

Initial GS in sequence is remains of thrombin cleavage site. D3 is amino acid 61 in the native protein sequence.

1   GLYSERASPSERLEUILEARGASPLEUSER
2   GLYLEUSERGLNLYSMETVALGLNTHRLEU
3   LEUGLUGLNILEARGSERASNTYRASPASP
4   TYRLEUTHRPHESERASNTHRTYRTHRASP
5   GLUGLUASNGLUTHRLEUILEASNLEUGLU
6   LYSTHRGLNSERASPLEUGLNLYSPHEMET
7   THRGLNLEUASPHISLEUILELYSASPASP
8   ILESERASNTHRGLNGLUILEILELYSASP
9   VALLEUGLUTYRLEULYSLYSLEUASPGLU
10   ILETYRGLYSERLEUARGASNHISSERGLN
11   LEUTHRGLUALALEUSERLEUGLYLYSARG
12   LEUSERLYSSERLEUHISGLUMETCYSGLY
13   ILEGLUPROLEUGLUGLUGLUILECYSSER
14   GLYLEUILEGLUGLNLEUTYRLYSLEUILE
15   THRALASERARGARGILELEUGLUSERCYS
16   ALAASPSERASNSERPROTYRILEHISHIS
17   LEUARGASNASPTYRGLNASPLEULEUGLN
18   GLUPHEGLNILESERLEULYSILELEUTHR
19   GLULYSCYSLEUGLUASNPROSERSERLEU
20   GLNASNLEUSERLEUTHRLEUVALSERILE
21   ILELYSTHRALA

Related Database Links:

PDB 2JQQ
DBJ GAA23495
EMBL CAA58155 CAA97130 CAY79877
GB AJP38895 AJR76215 AJR76714 AJR77212 AJR77712
REF NP_011635
SP P53271
TPG DAA08212
AlphaFold P53271

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks