BMRB Entry 16311
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PDB ID: 2kj4
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR16311
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Wang, Min; Zajicek, Jaroslav; Geiger, James; Prorok, Mary; Castellino, Francis. "Solution structure of the complex of VEK-30 and plasminogen kringle 2." J. Struct. Biol. 169, 349-359 (2010).
PubMed: 19800007
Assembly members:
plasminogen kringle 2, polymer, 87 residues, 10166.405 Da.
VEK-30, polymer, 32 residues, 3779.188 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Pichia pastoris Vector: pPIC9K
Entity Sequences (FASTA):
plasminogen kringle 2: YVEFSEECMHGSGENYDGKI
SKTMSGLECQAWDSQSPHAH
GYIPSKFPNKNLKKNYCRNP
DRDLRPWCFTTDPNKRWEYC
DIPRCAA
VEK-30: GSVEKLTADAELQRLKNERH
EEAELERLKSEY
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 523 |
| 15N chemical shifts | 128 |
| 1H chemical shifts | 815 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | plasminogen kringle 2 | 1 |
| 2 | VEK-30 | 2 |
Entities:
Entity 1, plasminogen kringle 2 87 residues - 10166.405 Da.
| 1 | TYR | VAL | GLU | PHE | SER | GLU | GLU | CYS | MET | HIS | ||||
| 2 | GLY | SER | GLY | GLU | ASN | TYR | ASP | GLY | LYS | ILE | ||||
| 3 | SER | LYS | THR | MET | SER | GLY | LEU | GLU | CYS | GLN | ||||
| 4 | ALA | TRP | ASP | SER | GLN | SER | PRO | HIS | ALA | HIS | ||||
| 5 | GLY | TYR | ILE | PRO | SER | LYS | PHE | PRO | ASN | LYS | ||||
| 6 | ASN | LEU | LYS | LYS | ASN | TYR | CYS | ARG | ASN | PRO | ||||
| 7 | ASP | ARG | ASP | LEU | ARG | PRO | TRP | CYS | PHE | THR | ||||
| 8 | THR | ASP | PRO | ASN | LYS | ARG | TRP | GLU | TYR | CYS | ||||
| 9 | ASP | ILE | PRO | ARG | CYS | ALA | ALA |
Entity 2, VEK-30 32 residues - 3779.188 Da.
| 1 | GLY | SER | VAL | GLU | LYS | LEU | THR | ALA | ASP | ALA | ||||
| 2 | GLU | LEU | GLN | ARG | LEU | LYS | ASN | GLU | ARG | HIS | ||||
| 3 | GLU | GLU | ALA | GLU | LEU | GLU | ARG | LEU | LYS | SER | ||||
| 4 | GLU | TYR |
Related Database Links:
| PDB | 1I5K 2KJ4 2DOI |
| EMBL | CAA80222 |
| GB | AAN64682 AAQ64516 AAQ64518 AAQ64521 AEQ25265 |
| REF | WP_014635750 WP_023609730 YP_006072819 |
| SP | P49054 |
| AlphaFold | P49054 |
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CSV: Backbone
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SPARKY: Backbone
or all simulated peaks