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PDB ID: 2knb
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16813
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
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Citation: Trempe, Jean-Francois; Chen, Carol X-Q; Grenier, Karl; Camacho, Edna Matta; Kozlov, Guennadi; McPherson, Peter; Gehring, Kalle; Fon, Edward. "SH3 domains from a subset of BAR proteins define a Ubl-binding domain and implicate parkin in synaptic ubiquitination." Mol. Cell 36, 1034-1047 (2009).
PubMed: 20064468
Assembly members:
Ubl, polymer, 81 residues, 8738.083 Da.
SH3, polymer, 71 residues, 7121.919 Da.
Natural source: Common Name: Norway rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX-6p1
Data type | Count |
13C chemical shifts | 406 |
15N chemical shifts | 150 |
1H chemical shifts | 833 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | Ubl | 1 |
2 | SH3 | 2 |
Entity 1, Ubl 81 residues - 8738.083 Da.
Residues 1-5 represent a non-native tag generated after 3C protease cleavage of N-terminal GST
1 | GLY | PRO | LEU | GLY | SER | MET | ILE | VAL | PHE | VAL | ||||
2 | ARG | PHE | ASN | SER | SER | TYR | GLY | PHE | PRO | VAL | ||||
3 | GLU | VAL | ASP | SER | ASP | THR | SER | ILE | PHE | GLN | ||||
4 | LEU | LYS | GLU | VAL | VAL | ALA | LYS | ARG | GLN | GLY | ||||
5 | VAL | PRO | ALA | ASP | GLN | LEU | ARG | VAL | ILE | PHE | ||||
6 | ALA | GLY | LYS | GLU | LEU | GLN | ASN | HIS | LEU | THR | ||||
7 | VAL | GLN | ASN | CYS | ASP | LEU | GLU | GLN | GLN | SER | ||||
8 | ILE | VAL | HIS | ILE | VAL | GLN | ARG | PRO | GLN | ARG | ||||
9 | LYS |
Entity 2, SH3 71 residues - 7121.919 Da.
Residues 1-9 represent a non-native tag generated after thrombin protease cleavage of N-terminal GST
1 | GLY | SER | ARG | ARG | ALA | SER | VAL | GLY | SER | ASP | ||||
2 | GLN | PRO | CYS | CYS | ARG | ALA | LEU | TYR | ASP | PHE | ||||
3 | GLU | PRO | GLU | ASN | GLU | GLY | GLU | LEU | GLY | PHE | ||||
4 | LYS | GLU | GLY | ASP | ILE | ILE | THR | LEU | THR | ASN | ||||
5 | GLN | ILE | ASP | GLU | ASN | TRP | TYR | GLU | GLY | MET | ||||
6 | LEU | HIS | GLY | GLN | SER | GLY | PHE | PHE | PRO | ILE | ||||
7 | ASN | TYR | VAL | GLU | ILE | LEU | VAL | ALA | LEU | PRO | ||||
8 | HIS |
PDB | 2KNB 4K95 4ZYN 3IQL |
DBJ | BAA92431 BAC31888 BAE22364 BAE23963 |
GB | AAF34874 AAF68666 AAG37013 AAM21453 AAM21456 AAH18385 AAI23533 AAL37407 AAL37408 AIL95726 |
REF | NP_064478 NP_001070308 NP_062408 XP_001925192 XP_002920770 XP_003783082 |
SP | Q9JK66 Q62420 |
TPG | DAA26952 |
AlphaFold | Q9JK66 Q62420 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks