BMRB Entry 16834

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PDB ID: 2kal
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16834
MolProbity Validation Chart

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Title:
NMR structure of fully methylated GATC site
Deposition date:
2010-04-04
Original release date:
2010-07-27
Authors:
Bang, Jongchul; Bae, Sung-Hun; Park, Chin-Ju; Lee, Joon-Hwa; Choi, Byong-Seok
Citation:

Citation: Bang, Jongchul; Bae, Sung-Hun; Park, Chin-Ju; Lee, Joon-Hwa; Choi, Byong-Seok. "Structural and dynamics study of DNA dodecamer duplexes that contain un-, hemi-, or fully methylated GATC sites."  J. Am. Chem. Soc. 130, 17688-17696 (2008).
PubMed: 19108701

Assembly members:

Assembly members:
DNA_1, polymer, 12 residues, 3717.473 Da.
DNA_2, polymer, 12 residues, 3637.424 Da.

Natural source:

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: chemical synthesis   Vector: not applicable

Entity Sequences (FASTA):

Entity Sequences (FASTA):
DNA_1: GCGAGATCTGCG
DNA_2: CGCAGATCTCGC

Data sets:
Data typeCount
1H chemical shifts137

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA GCGAGATCTGCG1
2DNA CGCAGATCTCGC2

Entities:

Entity 1, DNA GCGAGATCTGCG 12 residues - 3717.473 Da.

1   DGDCDGDADGDADTDCDTDG
2   DCDG

Entity 2, DNA CGCAGATCTCGC 12 residues - 3637.424 Da.

1   DCDGDCDADGDADTDCDTDC
2   DGDC