BMRB Entry 16849
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PDB ID: 2kkd
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR16849
MolProbity Validation Chart
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NMR-STAR v3 text file.
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Citation: Goodfellow, Brian; Duarte, Iven; Macedo, Anjos; Volkman, Brian; Nunes, Sofia; Moura, I.; Markley, John; Moura, Jose. "An NMR structural study of nickel-substituted rubredoxin." J. Biol. Inorg. Chem. 15, 409-420 (2010).
PubMed: 19997764
Assembly members:
rubredoxin, polymer, 52 residues, 5618.896 Da.
NI, non-polymer, 58.693 Da.
Natural source: Common Name: Desulfovibrio vulgaris Taxonomy ID: 881 Superkingdom: Bacteria Kingdom: not available Genus/species: Desulfovibrio vulgaris
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pT7-7
Entity Sequences (FASTA):
rubredoxin: MKKYVCTVCGYEYDPAEGDP
DNGVKPGTSFDDLPADWVCP
VCGAPKSEFEAA
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 304 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | rubredoxin | 1 |
| 2 | Nickel II ion | 2 |
Entities:
Entity 1, rubredoxin 52 residues - 5618.896 Da.
| 1 | MET | LYS | LYS | TYR | VAL | CYS | THR | VAL | CYS | GLY | ||||
| 2 | TYR | GLU | TYR | ASP | PRO | ALA | GLU | GLY | ASP | PRO | ||||
| 3 | ASP | ASN | GLY | VAL | LYS | PRO | GLY | THR | SER | PHE | ||||
| 4 | ASP | ASP | LEU | PRO | ALA | ASP | TRP | VAL | CYS | PRO | ||||
| 5 | VAL | CYS | GLY | ALA | PRO | LYS | SER | GLU | PHE | GLU | ||||
| 6 | ALA | ALA |
Entity 2, Nickel II ion - Ni - 58.693 Da.
| 1 | NI |