BMRB Entry 17564

Name: Glycyl-tRNA(UCC)1B anticodon stem-loop from Staphylococcus epidermidis
Published: 2012-04-04

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PDB ID: 2lbk
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR17564
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Glycyl-tRNA(UCC)1B anticodon stem-loop from Staphylococcus epidermidis

Deposition date:

2011-03-31

Original release date:

2012-04-04

Authors:

Chang, Andrew; Nikonowicz, Edward

Citation:

Citation: Chang, Andrew; Nikonowicz, Edward. "Structure solution of three glycyl-tRNA anticodon stem-loop" .

Assembly members:

Assembly members:
Glycyl-tRNA(UCC)1B anticodon stem-loop, polymer, 17 residues, 5371.249 Da.

Natural source:

Natural source: Common Name: S. epidermidis Taxonomy ID: 1282 Superkingdom: Bacteria Kingdom: not available Genus/species: Staphylococcus epidermidis

Experimental source:

Experimental source: Production method: enzymatic semisynthesis Host organism: Staphylococcus epidermidis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Glycyl-tRNA(UCC)1B anticodon stem-loop: GGGACCUUCCCGGUCUC

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	87
1H chemical shifts	107

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Glycyl-tRNA(UCC)1B anticodon stem-loop	1

Entities:

Entity 1, Glycyl-tRNA(UCC)1B anticodon stem-loop 17 residues - 5371.249 Da.

1

G

A

C

U

C

2

C

G

U

C

U

C

Name	Sample	Sample state	Sample conditions
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-1H COSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
2D HCN	sample_1	isotropic	sample_conditions_1

BMRB Entry 17564

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

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NMR spectrometers: