BMRB Entry 17697

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PDB ID: 2le6
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR17697
MolProbity Validation Chart

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Title:
Structure of a dimeric all-parallel-stranded G-quadruplex stacked via the 5'-to-5' interface
Deposition date:
2011-06-10
Original release date:
2011-08-19
Authors:
Do, Ngoc Quang; Lim, Kah Wai; Teo, Ming Hoon; Heddi, Brahim; Phan, Anh Tuan
Citation:

Citation: Do, Ngoc Quang; Lim, Kah Wai; Teo, Ming Hoon; Heddi, Brahim; Phan, Anh Tuan. "Stacking of G-quadruplexes: NMR structure of a G-rich oligonucleotide with potential anti-HIV and anticancer activity."  Nucleic Acids Res. 39, 9448-9457 (2011).
PubMed: 21840903

Assembly members:

Assembly members:
DNA_(5'-D(*GP*IP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')_, polymer, 16 residues, 5107.312 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
DNA_(5'-D(*GP*IP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')_: GXGTGGGTGGGTGGGT

Data sets:
Data typeCount
1H chemical shifts127

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1G-quadruplex_strand_11
2G-quadruplex_strand_21

Entities:

Entity 1, G-quadruplex_strand_1 16 residues - 5107.312 Da.

1   DGDIDGDTDGDGDGDTDGDG
2   DGDTDGDGDGDT