BMRB Entry 17729

Name: Structure of the DNA complex of the C-Terminal domain of Ler
Published: 2011-12-06

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PDB ID: 2lev
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR17729
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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Structure of the DNA complex of the C-Terminal domain of Ler

Deposition date:

2011-06-23

Original release date:

2011-12-06

Authors:

Cordeiro, Tiago; Schimdt, Holger; Grisienger, Christian; Pons, Miquel; Cordeiro, Tiago

Citation:

Citation: Cordeiro, Tiago; Schimdt, Holger; Madrid, Cristina; Juarez, Antonio; Bernado, Pau; Grisienger, Christian; Garcia, Jesus; Pons, Miquel. "Indirect DNA Readout by an H-NS Related Protein: Structure of the DNA Complex of the C-Terminal Domain of Ler" PLoS Pathog. 7, e1002380-. (2011).
PubMed: 22114557

Assembly members:

Assembly members:
CT-Ler, polymer, 57 residues, 6703.430 Da.
LeeH_A, polymer, 15 residues, 6703.430 Da.
LeeH_B, polymer, 15 residues, 6703.430 Da.

Natural source:

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: PHAT2

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CT-Ler: SHHHHHHSMGNSSKGVYYRN EEGQTWSGVGRQPRWLKEAL LNGMKKEDFLVKDTEEE
LeeH_A: GCGATAATTGATAGG
LeeH_B: CCTATCAATTATCGC

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	151
15N chemical shifts	59
1H chemical shifts	637

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CT-Ler	1
2	LeeH_A	2
3	LeeH_B	3

Entities:

Entity 1, CT-Ler 57 residues - 6703.430 Da.

1

SER

HIS

SER

MET

GLY

2

ASN

SER

LYS

GLY

VAL

TYR

ARG

ASN

3

GLU

GLY

GLN

THR

TRP

SER

GLY

VAL

GLY

4

ARG

GLN

PRO

ARG

TRP

LEU

LYS

GLU

ALA

LEU

5

LEU

ASN

GLY

MET

LYS

GLU

ASP

PHE

LEU

6

VAL

LYS

ASP

THR

GLU

Entity 2, LeeH_A 15 residues - 6703.430 Da.

1

DG

DC

DG

DA

DT

DA

DT

DG

2

DA

DT

DA

DG

Entity 3, LeeH_B 15 residues - 6703.430 Da.

1

DC

DT

DA

DT

DC

DA

DT

2

DA

DT

DC

DG

DC

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_3	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D HNHA	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_2	isotropic	sample_conditions_1
2D 1H-1H (13C-ed) NOESY	sample_2	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H (13C-fil) NOESY	sample_2	isotropic	sample_conditions_1
2D 1H-1H (15N/13C-fil) NOESY	sample_1	isotropic	sample_conditions_1
3D 15N/13C-fil/13c-ed- NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H (13C-fil) TOCSY	sample_2	isotropic	sample_conditions_1

PDB	2LEV
DBJ	BAB38011 BAI28393 BAI32361 BAI37557 BAT37610
EMBL	CAC81843 CAG17510 CAI43893 CAR47961 CAS11516
GB	AAC31533 AAC38364 AAG58852 AAK26696 AAL57523
REF	NP_312615 WP_001055727 WP_001055728 WP_001310359 WP_001339878

BMRB Entry 17729

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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