BMRB Entry 17877

Name: Solution structure of a shortened antiterminator hairpin from a Mg2+ riboswitch
Published: 2012-08-22

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PDB ID: 2li4
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR17877
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of a shortened antiterminator hairpin from a Mg2+ riboswitch

Deposition date:

2011-08-22

Original release date:

2012-08-22

Authors:

Korth, Maximiliane; Sigel, Roland

Citation:

Citation: Korth, Maximiliane; Sigel, Roland. "Unusually high-affinity Mg(2+) binding at the AU-rich sequence within the antiterminator hairpin of a Mg(2+) riboswitch." Chem. Biodivers. 9, 2035-2049 (2012).
PubMed: 22976989

Assembly members:

Assembly members:
RNA_(32-MER), polymer, 32 residues, 10304.251 Da.

Natural source:

Natural source: Common Name: Yersinia enterocolitica Taxonomy ID: 630 Superkingdom: Bacteria Kingdom: not available Genus/species: Yersinia enterocolitica

Experimental source:

Experimental source: Production method: cell free synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
RNA_(32-MER): GGACCGAUAAGGUAGAAAUG CCUUAUCGGUCC

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	232

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	RNA (32-MER)	1

Entities:

Entity 1, RNA (32-MER) 32 residues - 10304.251 Da.

1

G

A

C

G

A

U

A

2

G

U

A

G

A

U

G

3

C

U

A

U

C

G

U

4

C

Name	Sample	Sample state	Sample conditions
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_2	isotropic	sample_conditions_2
2D 1H-1H NOESY	sample_3	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_4	isotropic	sample_conditions_3

BMRB Entry 17877

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers: