BMRB Entry 17887

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PDB ID: 2lib
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR17887
MolProbity Validation Chart

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Title:
DNA sequence context conceals alpha anomeric lesion
Deposition date:
2011-08-27
Original release date:
2012-01-18
Authors:
Johnson, Christopher; Spring, Alexander; Cunningham, Richard; Germann, Markus
Citation:

Citation: Johnson, Christopher; Spring, Alexander; Desai, Sunil; Cunningham, Richard; Germann, Markus. "DNA Sequence Context Conceals -Anomeric Lesions."  J. Mol. Biol. 416, 425-437 (2012).
PubMed: 22227386

Assembly members:

Assembly members:
DNA_(5'-D(*GP*TP*CP*CP*ADA*GP*GP*AP*CP*G)-3')_, polymer, 10 residues, 2756.833 Da.
DNA_(5'-D(*CP*GP*TP*CP*CP*TP*GP*GP*AP*C)-3')_, polymer, 10 residues, 3021.004 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis   Host organism: n/a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
DNA_(5'-D(*GP*TP*CP*CP*ADA*GP*GP*AP*CP*G)-3')_: GTCCXGGACG
DNA_(5'-D(*CP*GP*TP*CP*CP*TP*GP*GP*AP*C)-3')_: CGTCCTGGAC

Data sets:
Data typeCount
13C chemical shifts56
1H chemical shifts171
31P chemical shifts18

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA_chain_11
2DNA_chain_22

Entities:

Entity 1, DNA_chain_1 10 residues - 2756.833 Da.

1   DGDTDCDCA3ADGDGDADCDG

Entity 2, DNA_chain_2 10 residues - 3021.004 Da.

1   DCDGDTDCDCDTDGDGDADC