BMRB Entry 18095

Name: Solution NMR Structure of Lysine-specific demethylase lid from Drosophila melanogaster, Northeast Structural Genomics Consortium Target FR824D
Published: 2011-12-01

Click here to enlarge.

PDB ID: 2lm1
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18095
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution NMR Structure of Lysine-specific demethylase lid from Drosophila melanogaster, Northeast Structural Genomics Consortium Target FR824D

Deposition date:

2011-11-18

Original release date:

2011-12-01

Authors:

Mills, Jeffrey; Lee, Dan; Kohan, Eitan; Sahdev, Seema; Acton, T.; Xiao, R.; Everett, J.; Montelione, G.; Szyperski, Thomas

Citation:

Citation: Mills, Jeffrey; Lee, Dan; Kohan, Eitan; Sahdev, Seema; Acton, T.; Xiao, R.; Everett, J.; Montelione, G.; Szyperski, Thomas. "Northeast Structural Genomics Consortium Target FR824D" To be published ., .-..

Assembly members:

Assembly members:
FR824D, polymer, 107 residues, 12493.614 Da.

Natural source:

Natural source: Common Name: fruit fly Taxonomy ID: 7227 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Drosophila melanogaster

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET15Nano6HT_NESG

Entity Sequences (FASTA):

Entity Sequences (FASTA):
FR824D: PRVQRLNELEAKTRVKLNFL DQIAKFWELQGSSLKIPMVE RKALDLYTLHRIVQEEGGME QTTKDRKWAKVANRMQYPSS KSVGATLKAHYERILHPFEV YTSGKVL

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	464
15N chemical shifts	112
1H chemical shifts	748

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	FR824D	1

Entities:

Entity 1, FR824D 107 residues - 12493.614 Da.

1

PRO

ARG

VAL

GLN

ARG

LEU

ASN

GLU

LEU

GLU

2

ALA

LYS

THR

ARG

VAL

LYS

LEU

ASN

PHE

LEU

3

ASP

GLN

ILE

ALA

LYS

PHE

TRP

GLU

LEU

GLN

4

GLY

SER

LEU

LYS

ILE

PRO

MET

VAL

GLU

5

ARG

LYS

ALA

LEU

ASP

LEU

TYR

THR

LEU

HIS

6

ARG

ILE

VAL

GLN

GLU

GLY

MET

GLU

7

GLN

THR

LYS

ASP

ARG

LYS

TRP

ALA

LYS

8

VAL

ALA

ASN

ARG

MET

GLN

TYR

PRO

SER

9

LYS

SER

VAL

GLY

ALA

THR

LEU

LYS

ALA

HIS

10

TYR

GLU

ARG

ILE

LEU

HIS

PRO

PHE

GLU

VAL

11

TYR

THR

SER

GLY

LYS

VAL

LEU

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sampleNC	isotropic	sample_conditions_1
3D HNCO	sampleNC	isotropic	sample_conditions_1
3D CBCA(CO)NH	sampleNC	isotropic	sample_conditions_1
3D HNCACB	sampleNC	isotropic	sample_conditions_1
3D HCCH-COSY	sampleNC	isotropic	sample_conditions_1
3D simutaneous 13C-aromatic,13C-aliphatic,15N edited 1H-1H NOESY	sampleNC	isotropic	sample_conditions_1
2D 1H-13C HSQC	sampleNC5	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sampleNC	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sampleNC	isotropic	sample_conditions_1

PDB	2LM1
GB	AAF52319 AAM11379 AAN10569 AFH03582 AFH03583
REF	NP_001245908 NP_001245909 NP_001245910 NP_001285649 NP_523486
SP	Q9VMJ7
AlphaFold	Q9VMJ7

BMRB Entry 18095

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: