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PDB ID: 2lms
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18135
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Ghasriani, Houman; Belcourt, Pascal; Sauve, Simon; Hodgson, Derek; Brochu, Denis; Gilbert, Michel; Aubin, Yves. "A single N-acetylgalactosamine residue at threonine 106 modifies the dynamics and structure of interferon 2a around the glycosylation site." J. Biol. Chem. 288, 247-254 (2013).
PubMed: 23184955
Assembly members:
Interferon_Alpha-2a, polymer, 165 residues, 19264.242 Da.
A2G, non-polymer, 221.208 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET-15b
Entity Sequences (FASTA):
Interferon_Alpha-2a: CDLPQTHSLGSRRTLMLLAQ
MRKISLFSCLKDRHDFGFPQ
EEFGNQFQKAETIPVLHEMI
QQIFNLFSTKDSSAAWDETL
LDKFYTELYQQLNDLEACVI
QGVGVTETPLMKEDSILAVR
KYFQRITLYLKEKKYSPCAW
EVVRAEIMRSFSLSTNLQES
LRSKE
Data type | Count |
13C chemical shifts | 731 |
15N chemical shifts | 178 |
1H chemical shifts | 1197 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | entity_1 | 1 |
2 | SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) | 2 |
Entity 1, entity_1 165 residues - 19264.242 Da.
O-glycosylation at Thr106, with N-Acetyl-D-Galactosamine(alpha).
1 | CYS | ASP | LEU | PRO | GLN | THR | HIS | SER | LEU | GLY | ||||
2 | SER | ARG | ARG | THR | LEU | MET | LEU | LEU | ALA | GLN | ||||
3 | MET | ARG | LYS | ILE | SER | LEU | PHE | SER | CYS | LEU | ||||
4 | LYS | ASP | ARG | HIS | ASP | PHE | GLY | PHE | PRO | GLN | ||||
5 | GLU | GLU | PHE | GLY | ASN | GLN | PHE | GLN | LYS | ALA | ||||
6 | GLU | THR | ILE | PRO | VAL | LEU | HIS | GLU | MET | ILE | ||||
7 | GLN | GLN | ILE | PHE | ASN | LEU | PHE | SER | THR | LYS | ||||
8 | ASP | SER | SER | ALA | ALA | TRP | ASP | GLU | THR | LEU | ||||
9 | LEU | ASP | LYS | PHE | TYR | THR | GLU | LEU | TYR | GLN | ||||
10 | GLN | LEU | ASN | ASP | LEU | GLU | ALA | CYS | VAL | ILE | ||||
11 | GLN | GLY | VAL | GLY | VAL | THR | GLU | THR | PRO | LEU | ||||
12 | MET | LYS | GLU | ASP | SER | ILE | LEU | ALA | VAL | ARG | ||||
13 | LYS | TYR | PHE | GLN | ARG | ILE | THR | LEU | TYR | LEU | ||||
14 | LYS | GLU | LYS | LYS | TYR | SER | PRO | CYS | ALA | TRP | ||||
15 | GLU | VAL | VAL | ARG | ALA | GLU | ILE | MET | ARG | SER | ||||
16 | PHE | SER | LEU | SER | THR | ASN | LEU | GLN | GLU | SER | ||||
17 | LEU | ARG | SER | LYS | GLU |
Entity 2, SUGAR (N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE) - C8 H15 N O6 - 221.208 Da.
1 | A2G |
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SPARKY: Backbone
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