BMRB Entry 18430

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PDB ID: 2lsf
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR18430
MolProbity Validation Chart

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Title:
Structure and Stability of Duplex DNA Containing (5 S) 5 ,8-Cyclo-2 -Deoxyadenosine: An Oxidative Lesion Repair by NER.
Deposition date:
2012-04-30
Original release date:
2012-09-10
Authors:
Zaliznyak, Tatiana; de los Santos, Carlos; Lukin, Mark
Citation:

Citation: Zaliznyak, Tatiana; Lukin, Mark; de los Santos, Carlos. "Structure and stability of duplex DNA containing (5'S)-5',8-cyclo-2'-deoxyadenosine: an oxidatively generated lesion repaired by NER."  Chem. Res. Toxicol. 25, 2103-2111 (2012).
PubMed: 22928555

Assembly members:

Assembly members:
11_mer_oligonucleotide_B, polymer, 11 residues, Formula weight is not available
11_mer_oligonucleotide_D, polymer, 11 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
11_mer_oligonucleotide_B: CGTACXCATGC
11_mer_oligonucleotide_D: GCATGTGTACG

Data sets:
Data typeCount
1H chemical shifts151

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
111_mer_oligonucleotide_B1
211_mer_oligonucleotide_D2

Entities:

Entity 1, 11_mer_oligonucleotide_B 11 residues - Formula weight is not available

X represents (5 S) 5 ,8-Cyclo-2 -Deoxyadenosine

1   DCDGDTDADC02IDCDADTDG
2   DC

Entity 2, 11_mer_oligonucleotide_D 11 residues - Formula weight is not available

1   DGDCDADTDGDTDGDTDADC
2   DG