BMRB Entry 18465

Name: SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED PROTEIN, ROSSMANN 3x1 FOLD, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR157
Published: 2012-06-11

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PDB ID: 2lta
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18465
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED PROTEIN, ROSSMANN 3x1 FOLD, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR157

Deposition date:

2012-05-15

Original release date:

2012-06-11

Authors:

Liu, Gaohua; Koga, Rie; Koga, Nobuyasu; Xiao, Rong; Pederson, Kari; Hamilton, Keith; Kohan, Eitan; Acton, Thomas; Kornhaber, Gregory; Everett, John; Baker, David; Montelione, Gaetano; Northeast Structural Genomics Consortium, NESG

Citation:

Citation: Koga, Nobuyasu; Tatsumi-Koga, Rie; Liu, Gaohua; Xiao, Rong; Acton, Thomas; Montelione, Gaetano; Baker, David. "Principles for designing ideal protein structures" Nature 491, 222-227 (2012).
PubMed: 23135467

Assembly members:

Assembly members:
OR157, polymer, 110 residues, 13065.128 Da.

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET29b+

Entity Sequences (FASTA):

Entity Sequences (FASTA):
OR157: MGSKIIVIISSDDTTLEELA RKIKDEGLEVYILLKDKDEK RLEEKIQKLKSQGFEVRKVK DDDDIDKWIDKIKKERPQLE VRKVTDEDQAKQILEDLKKK GSLEHHHHHH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	483
15N chemical shifts	105
1H chemical shifts	800

Time Domain Data

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	OR157	1

Entities:

Entity 1, OR157 110 residues - 13065.128 Da.

1	MET	GLY	SER	LYS	ILE	ILE	VAL	ILE	ILE	SER
2	SER	ASP	ASP	THR	THR	LEU	GLU	GLU	LEU	ALA
3	ARG	LYS	ILE	LYS	ASP	GLU	GLY	LEU	GLU	VAL
4	TYR	ILE	LEU	LEU	LYS	ASP	LYS	ASP	GLU	LYS
5	ARG	LEU	GLU	GLU	LYS	ILE	GLN	LYS	LEU	LYS
6	SER	GLN	GLY	PHE	GLU	VAL	ARG	LYS	VAL	LYS
7	ASP	ASP	ASP	ASP	ILE	ASP	LYS	TRP	ILE	ASP
8	LYS	ILE	LYS	LYS	GLU	ARG	PRO	GLN	LEU	GLU
9	VAL	ARG	LYS	VAL	THR	ASP	GLU	ASP	GLN	ALA
10	LYS	GLN	ILE	LEU	GLU	ASP	LEU	LYS	LYS	LYS
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_NC	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_NC5	isotropic	sample_conditions_1
3D HNCO	sample_NC	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_NC	isotropic	sample_conditions_1
3D HNCACB	sample_NC	isotropic	sample_conditions_1
3D 1H-13C arom NOESY	sample_NC	isotropic	sample_conditions_1
3D simutaneous 13C-aromatic,13C-aliphatic,15N edited 1H-1H NOESY	sample_NC	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_NC5_RDC	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_NC	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_NC	isotropic	sample_conditions_1

BMRB Entry 18465

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	GLY	SER	LYS	ILE	ILE	VAL	ILE	ILE	SER
2	SER	ASP	ASP	THR	THR	LEU	GLU	GLU	LEU	ALA
3	ARG	LYS	ILE	LYS	ASP	GLU	GLY	LEU	GLU	VAL
4	TYR	ILE	LEU	LEU	LYS	ASP	LYS	ASP	GLU	LYS
5	ARG	LEU	GLU	GLU	LYS	ILE	GLN	LYS	LEU	LYS
6	SER	GLN	GLY	PHE	GLU	VAL	ARG	LYS	VAL	LYS
7	ASP	ASP	ASP	ASP	ILE	ASP	LYS	TRP	ILE	ASP
8	LYS	ILE	LYS	LYS	GLU	ARG	PRO	GLN	LEU	GLU
9	VAL	ARG	LYS	VAL	THR	ASP	GLU	ASP	GLN	ALA
10	LYS	GLN	ILE	LEU	GLU	ASP	LEU	LYS	LYS	LYS
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

1	MET	GLY	SER	LYS	ILE	ILE	VAL	ILE	ILE	SER
2	SER	ASP	ASP	THR	THR	LEU	GLU	GLU	LEU	ALA
3	ARG	LYS	ILE	LYS	ASP	GLU	GLY	LEU	GLU	VAL
4	TYR	ILE	LEU	LEU	LYS	ASP	LYS	ASP	GLU	LYS
5	ARG	LEU	GLU	GLU	LYS	ILE	GLN	LYS	LEU	LYS
6	SER	GLN	GLY	PHE	GLU	VAL	ARG	LYS	VAL	LYS
7	ASP	ASP	ASP	ASP	ILE	ASP	LYS	TRP	ILE	ASP
8	LYS	ILE	LYS	LYS	GLU	ARG	PRO	GLN	LEU	GLU
9	VAL	ARG	LYS	VAL	THR	ASP	GLU	ASP	GLN	ALA
10	LYS	GLN	ILE	LEU	GLU	ASP	LEU	LYS	LYS	LYS
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

1	MET	GLY	SER	LYS	ILE	ILE	VAL	ILE	ILE	SER
2	SER	ASP	ASP	THR	THR	LEU	GLU	GLU	LEU	ALA
3	ARG	LYS	ILE	LYS	ASP	GLU	GLY	LEU	GLU	VAL
4	TYR	ILE	LEU	LEU	LYS	ASP	LYS	ASP	GLU	LYS
5	ARG	LEU	GLU	GLU	LYS	ILE	GLN	LYS	LEU	LYS
6	SER	GLN	GLY	PHE	GLU	VAL	ARG	LYS	VAL	LYS
7	ASP	ASP	ASP	ASP	ILE	ASP	LYS	TRP	ILE	ASP
8	LYS	ILE	LYS	LYS	GLU	ARG	PRO	GLN	LEU	GLU
9	VAL	ARG	LYS	VAL	THR	ASP	GLU	ASP	GLN	ALA
10	LYS	GLN	ILE	LEU	GLU	ASP	LEU	LYS	LYS	LYS
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS