BMRB Entry 18490

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PDB ID: 2lto
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18490
MolProbity Validation Chart

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Title:
TDRD3 complex
Deposition date:
2012-05-30
Original release date:
2012-11-02
Authors:
Sikorsky, Tomas
Citation:

Citation: Sikorsky, Tomas; Hobor, Fruzsina; Krizanova, Eva; Pasulka, Josef; Kubicek, Karel; Stefl, Richard. "Recognition of asymmetrically dimethylated arginine by TDRD3."  Nucleic Acids Res. 40, 11748-11755 (2012).
PubMed: 23066109

Assembly members:

Assembly members:
entity_1, polymer, 58 residues, 6827.864 Da.
TDRD3_2, polymer, 13 residues, 1494.620 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET22b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: MKMWKPGDECFALYWEDNKF YRAEVEALHSSGMTAVVKFI DYGNYEEVLLSNIKPILE
TDRD3_2: YSPSSPXYTPQSP

Data sets:
Data typeCount
13C chemical shifts176
15N chemical shifts53
1H chemical shifts346

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1TDRD3, chain 11
2TDRD3, chain 22

Entities:

Entity 1, TDRD3, chain 1 58 residues - 6827.864 Da.

1   METLYSMETTRPLYSPROGLYASPGLUCYS
2   PHEALALEUTYRTRPGLUASPASNLYSPHE
3   TYRARGALAGLUVALGLUALALEUHISSER
4   SERGLYMETTHRALAVALVALLYSPHEILE
5   ASPTYRGLYASNTYRGLUGLUVALLEULEU
6   SERASNILELYSPROILELEUGLU

Entity 2, TDRD3, chain 2 13 residues - 1494.620 Da.

1   TYRSERPROSERSERPRODA2TYRTHRPRO
2   GLNSERPRO

Related Database Links:

PDB 2LTO 3PMT 3PNW 3S6W
DBJ BAB14950 BAJ17879 BAK63800
EMBL CAD97894 CAL37786
GB AAH30514 AAH60876 ACC94142 AIC52422 EAW52079
REF NP_001139542 NP_001139543 NP_110421 XP_003257452 XP_003257453
SP Q9H7E2
AlphaFold Q9H7E2 Q6NX41

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