BMRB Entry 18558

Name: Solution NMR Structure de novo designed rossmann 2x2 fold protein, Northeast Structural Genomics Consortium (NESG) Target OR16
Published: 2012-07-31

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PDB ID: 2lv8
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR18558
MolProbity Validation Chart

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution NMR Structure de novo designed rossmann 2x2 fold protein, Northeast Structural Genomics Consortium (NESG) Target OR16

Deposition date:

2012-06-29

Original release date:

2012-07-31

Authors:

Liu, Gaohua; Koga, Rie; Koga, Nobuyasu; Xiao, Rong; Pederson, Kari; Hamilton, Keith; Ciccosanti, Colleen; Acton, Thomas; Everett, John; Baker, David; Montelione, Gaetano

Citation:

Citation: Koga, Nobuyasu; Tatsumi-Koga, Rie; Liu, Gaohua; Xiao, Rong; Acton, Thomas; Montelione, Gaetano; Baker, David. "Principles for designing ideal protein structures" Nature 491, 222-227 (2012).
PubMed: 23135467

Assembly members:

Assembly members:
OR16, polymer, 110 residues, 13078.123 Da.

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET29b+

Entity Sequences (FASTA):

Entity Sequences (FASTA):
OR16: MLLYVLIISNDKKLIEEARK MAEKANLELRTVKTEDELKK YLEEFRKESQNIKVLILVSN DEELDKAKELAQKMEIDVRT RKVTSPDEAKRWIKEFSEEG GSLEHHHHHH

Data sets:

RDCs
- RDC_list_1
- RDC_list_2
spectral_peak_list
- spectral_peak_list_N
- spectral_peak_list_C

Data type	Count
residual dipolar couplings	170

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	OR16	1

Entities:

Entity 1, OR16 110 residues - 13078.123 Da.

1	MET	LEU	LEU	TYR	VAL	LEU	ILE	ILE	SER	ASN
2	ASP	LYS	LYS	LEU	ILE	GLU	GLU	ALA	ARG	LYS
3	MET	ALA	GLU	LYS	ALA	ASN	LEU	GLU	LEU	ARG
4	THR	VAL	LYS	THR	GLU	ASP	GLU	LEU	LYS	LYS
5	TYR	LEU	GLU	GLU	PHE	ARG	LYS	GLU	SER	GLN
6	ASN	ILE	LYS	VAL	LEU	ILE	LEU	VAL	SER	ASN
7	ASP	GLU	GLU	LEU	ASP	LYS	ALA	LYS	GLU	LEU
8	ALA	GLN	LYS	MET	GLU	ILE	ASP	VAL	ARG	THR
9	ARG	LYS	VAL	THR	SER	PRO	ASP	GLU	ALA	LYS
10	ARG	TRP	ILE	LYS	GLU	PHE	SER	GLU	GLU	GLY
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_NC	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_NC	isotropic	sample_conditions_1
3D HNCO	sample_NC	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_NC	isotropic	sample_conditions_1
3D HNCACB	sample_NC	isotropic	sample_conditions_1
3D 1H-13C arom NOESY	sample_NC	isotropic	sample_conditions_1
3D simutaneous 13C-aromatic,13C-aliphatic,15N edited 1H-1H NOESY	sample_NC	isotropic	sample_conditions_1
3D C(CO)NH	sample_NC	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_NC	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_NC5	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_NC5_RDC	isotropic	sample_conditions_1

BMRB Entry 18558

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	LEU	LEU	TYR	VAL	LEU	ILE	ILE	SER	ASN
2	ASP	LYS	LYS	LEU	ILE	GLU	GLU	ALA	ARG	LYS
3	MET	ALA	GLU	LYS	ALA	ASN	LEU	GLU	LEU	ARG
4	THR	VAL	LYS	THR	GLU	ASP	GLU	LEU	LYS	LYS
5	TYR	LEU	GLU	GLU	PHE	ARG	LYS	GLU	SER	GLN
6	ASN	ILE	LYS	VAL	LEU	ILE	LEU	VAL	SER	ASN
7	ASP	GLU	GLU	LEU	ASP	LYS	ALA	LYS	GLU	LEU
8	ALA	GLN	LYS	MET	GLU	ILE	ASP	VAL	ARG	THR
9	ARG	LYS	VAL	THR	SER	PRO	ASP	GLU	ALA	LYS
10	ARG	TRP	ILE	LYS	GLU	PHE	SER	GLU	GLU	GLY
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

1	MET	LEU	LEU	TYR	VAL	LEU	ILE	ILE	SER	ASN
2	ASP	LYS	LYS	LEU	ILE	GLU	GLU	ALA	ARG	LYS
3	MET	ALA	GLU	LYS	ALA	ASN	LEU	GLU	LEU	ARG
4	THR	VAL	LYS	THR	GLU	ASP	GLU	LEU	LYS	LYS
5	TYR	LEU	GLU	GLU	PHE	ARG	LYS	GLU	SER	GLN
6	ASN	ILE	LYS	VAL	LEU	ILE	LEU	VAL	SER	ASN
7	ASP	GLU	GLU	LEU	ASP	LYS	ALA	LYS	GLU	LEU
8	ALA	GLN	LYS	MET	GLU	ILE	ASP	VAL	ARG	THR
9	ARG	LYS	VAL	THR	SER	PRO	ASP	GLU	ALA	LYS
10	ARG	TRP	ILE	LYS	GLU	PHE	SER	GLU	GLU	GLY
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS

1	MET	LEU	LEU	TYR	VAL	LEU	ILE	ILE	SER	ASN
2	ASP	LYS	LYS	LEU	ILE	GLU	GLU	ALA	ARG	LYS
3	MET	ALA	GLU	LYS	ALA	ASN	LEU	GLU	LEU	ARG
4	THR	VAL	LYS	THR	GLU	ASP	GLU	LEU	LYS	LYS
5	TYR	LEU	GLU	GLU	PHE	ARG	LYS	GLU	SER	GLN
6	ASN	ILE	LYS	VAL	LEU	ILE	LEU	VAL	SER	ASN
7	ASP	GLU	GLU	LEU	ASP	LYS	ALA	LYS	GLU	LEU
8	ALA	GLN	LYS	MET	GLU	ILE	ASP	VAL	ARG	THR
9	ARG	LYS	VAL	THR	SER	PRO	ASP	GLU	ALA	LYS
10	ARG	TRP	ILE	LYS	GLU	PHE	SER	GLU	GLU	GLY
11	GLY	SER	LEU	GLU	HIS	HIS	HIS	HIS	HIS	HIS