BMRB Entry 18670

Name: Solution structure of the Sgt2 homodimerization domain
Published: 2012-11-20

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PDB ID: 2lxb
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18670
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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the Sgt2 homodimerization domain

Deposition date:

2012-08-19

Original release date:

2012-11-20

Authors:

Chartron, Justin; VanderVelde, David; Clemons, William

Citation:

Citation: Chartron, Justin; VanderVelde, David; Clemons, William. "Structures of the Sgt2/SGTA dimerization domain with the Get5/UBL4A UBL domain reveal an interaction that forms a conserved dynamic interface." Cell Rep. 2, 1620-1632 (2012).
PubMed: 23142665

Assembly members:

Assembly members:
Sgt2, polymer, 74 residues, 7889.790 Da.

Natural source:

Natural source: Common Name: Baker's yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET33b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Sgt2: SVDSASKEEIAALIVNYFSS IVEKKEISEDGADSLNVAMD CISEAFGFEREAVSGILGKS EFKGQHLADILNSA

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	284
15N chemical shifts	70
1H chemical shifts	426

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Sgt2 homodimerization domain, 1	1
2	Sgt2 homodimerization domain, 2	1

Entities:

Entity 1, Sgt2 homodimerization domain, 1 74 residues - 7889.790 Da.

1

SER

VAL

ASP

SER

ALA

SER

LYS

GLU

ILE

2

ALA

LEU

ILE

VAL

ASN

TYR

PHE

SER

3

ILE

VAL

GLU

LYS

GLU

ILE

SER

GLU

ASP

4

GLY

ALA

ASP

SER

LEU

ASN

VAL

ALA

MET

ASP

5

CYS

ILE

SER

GLU

ALA

PHE

GLY

PHE

GLU

ARG

6

GLU

ALA

VAL

SER

GLY

ILE

LEU

GLY

LYS

SER

7

GLU

PHE

LYS

GLY

GLN

HIS

LEU

ALA

ASP

ILE

8

LEU

ASN

SER

ALA

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D (H)CCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aromatic	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D HCCH-COSY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_3	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_2	anisotropic	sample_conditions_1

BMRB	18341
PDB	2LXB 2LXC 3ZDM 4ASV 4ASW
DBJ	GAA26330
EMBL	CAA99195 CAY86295
GB	AAC49487 AHY77314 AJP41546 AJT70966 AJT71456
REF	NP_014649
SP	Q12118
TPG	DAA10789
AlphaFold	Q12118

BMRB Entry 18670

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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