BMRB Entry 18842

Title:
NMR structure of the complex between the PH domain of the Tfb1 subunit from TFIIH and Rad4
Deposition date:
2012-11-16
Original release date:
2013-01-22
Authors:
Lafrance-Vanasse, Julien; Arseneault, Genevieve; Cappadocia, Laurent; Legault, Pascale; Omichinski, James
Citation:

Citation: Lafrance-Vanasse, Julien; Arseneault, Genevieve; Cappadocia, Laurent; Legault, Pascale; Omichinski, James. "Structural and functional evidence that Rad4 competes with Rad2 for binding to the Tfb1 subunit of TFIIH in NER."  Nucleic Acids Res. 41, 2736-2745 (2013).
PubMed: 23295669

Assembly members:

Assembly members:
Tfb1, polymer, 119 residues, 12903.807 Da.
Rad4, polymer, 42 residues, 1747.696 Da.

Natural source:

Natural source:   Common Name: baker's yeast   Taxonomy ID: 4932   Superkingdom: Eukaryota   Kingdom: Fungi   Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pGEX-2TK

Data sets:
Data typeCount
13C chemical shifts552
15N chemical shifts144
1H chemical shifts862

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Tfb11
2Rad42

Entities:

Entity 1, Tfb1 119 residues - 12903.807 Da.

1   PROSERHISSERGLYALAALAILEPHEGLU
2   LYSVALSERGLYILEILEALAILEASNGLU
3   ASPVALSERPROALAGLULEUTHRTRPARG
4   SERTHRASPGLYASPLYSVALHISTHRVAL
5   VALLEUSERTHRILEASPLYSLEUGLNALA
6   THRPROALASERSERGLULYSMETMETLEU
7   ARGLEUILEGLYLYSVALASPGLUSERLYS
8   LYSARGLYSASPASNGLUGLYASNGLUVAL
9   VALPROLYSPROGLNARGHISMETPHESER
10   PHEASNASNARGTHRVALMETASPASNILE
11   LYSMETTHRLEUGLNGLNILEILESERARG
12   TYRLYSASPALAASPGLYASNSERSER

Entity 2, Rad4 42 residues - 1747.696 Da.

1   GLYSERTHRASPASPSERVALGLUGLUILE
2   GLNSERSERGLUGLUASPTYRASPSERGLU
3   GLUPHEGLUASPVALTHRASPGLYASNGLU
4   VALALAGLYVALGLUASPILESERVALGLU
5   ILELYS

Related Database Links:

BMRB 18229 19791 25540
PDB 1Y5O 2GS0 2K2U 2L2I 2LOX 2M14 2MKR 2N0Y
DBJ GAA22531
EMBL CAY78811
GB AAA35143 AAB64747 AAU09707 AHY75284 AJP38011 AAA34944 AAA34945 AAB64689 AHY75718 EDN63138
REF NP_010597 NP_011089
SP P32776 P14736
TPG DAA12150 DAA07824
AlphaFold P32776 P14736

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks