BMRB Entry 18891

Name: Solution structure of the Tetrahymena telomerase RNA stem IV terminal loop
Published: 2013-01-24

Click here to enlarge.

PDB ID: 2m21
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR18891
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution structure of the Tetrahymena telomerase RNA stem IV terminal loop

Deposition date:

2012-12-11

Original release date:

2013-01-24

Authors:

Cash, Darian; Richards, Rebecca; Wu, Haihong; Trantirek, Lukas; O'Connor, Catherine; Feigon, Juli; Collins, Kathleen

Citation:

Citation: Richards, Rebecca; Wu, Haihong; Trantirek, Lukas; O'Connor, Catherine; Collins, Kathleen; Feigon, Juli. "Solution structure of the Tetrahymena telomerase RNA stem IV terminal loop" RNA 12, 1475-1485 (2006).
PubMed: 16809815

Assembly members:

Assembly members:
stemIV_telo_RNA, polymer, 21 residues, 6650.027 Da.

Natural source:

Natural source: Common Name: tetrahymena thermophila Taxonomy ID: 5911 Superkingdom: Eukaryota Kingdom: not available Genus/species: tetrahymena thermophila

Experimental source:

Experimental source: Production method: enzymatic synthesis Host organism: n/a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
stemIV_telo_RNA: GGCGAUACACUAUUUAUCGC C

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	141
15N chemical shifts	19
1H chemical shifts	181

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	stemIV_telo_RNA	1

Entities:

Entity 1, stemIV_telo_RNA 21 residues - 6650.027 Da.

1

G

C

G

A

U

A

C

A

C

2

U

A

U

A

U

C

G

C

3

C

Name	Sample	Sample state	Sample conditions
11echo and watergate	sample_1	isotropic	sample_conditions_1
2D TOCSY	sample_1	isotropic	sample_conditions_2
2D NOESY	sample_1	isotropic	sample_conditions_2
2D 15N-HMQC, 2D 15N-CPMG-NOESY, 2D JNN-HNN-COSY	sample_2	isotropic	sample_conditions_1
2D 13C-HSQCs	sample_2	isotropic	sample_conditions_2
2D HCCH COSY, 3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_2
3D 1H,13C HMQCs	sample_2	isotropic	sample_conditions_2

BMRB Entry 18891

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers: