BMRB Entry 19606

Name: Solution Structure of the UBA Domain of Human NBR1
Published: 2014-04-07

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PDB ID: 2mgw
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR19606
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of the UBA Domain of Human NBR1

Deposition date:

2013-11-09

Original release date:

2014-04-07

Authors:

Walinda, Erik; Morimoto, Daichi; Sugase, Kenji; Komatsu, Masaaki; Tochio, Hidehito; Shirakawa, Masahiro

Citation:

Citation: Walinda, Erik; Morimoto, Daichi; Sugase, Kenji; Konuma, Tsuyoshi; Tochio, Hidehito; Shirakawa, Masahiro. "Solution Structure of the Ubiquitin-associated (UBA) Domain of Human Autophagy Receptor NBR1 and its Interaction with Ubiquitin and Polyubiquitin." J. Biol. Chem. ., .-. (2014).
PubMed: 24692539

Assembly members:

Assembly members:
entity, polymer, 52 residues, 5918.827 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX-6P1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: GPLGSSEDQTAALMAHLFEM GFCDRQLNLRLLKKHNYNIL QVVTELLQLNNN

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	356
13C chemical shifts	176
15N chemical shifts	50

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	UBA Domain of Human NBR1	1

Entities:

Entity 1, UBA Domain of Human NBR1 52 residues - 5918.827 Da.

1

GLY

PRO

LEU

GLY

SER

GLU

ASP

GLN

THR

2

ALA

LEU

MET

ALA

HIS

LEU

PHE

GLU

MET

3

GLY

PHE

CYS

ASP

ARG

GLN

LEU

ASN

LEU

ARG

4

LEU

LYS

HIS

ASN

TYR

ASN

ILE

LEU

5

GLN

VAL

THR

GLU

LEU

GLN

LEU

ASN

6

ASN

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aromatic	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC IPAP	aniso	anisotropic	sample_conditions_1
2D 1H-15N HSQC IPAP	sample_1	isotropic	sample_conditions_1

PDB	2MGW 2MJ5
DBJ	BAA06417 BAF82694 BAG09582 BAH12580
EMBL	CAA54274 CAH90613
GB	AAI49980 AAS15047 EAW60946 EAW60947 EAW60949
REF	NP_001093837 NP_001127309 NP_005890 NP_114068 XP_001097043
SP	Q14596 Q5RC94
TPG	DAA18460
AlphaFold	Q14596 Q5RC94

BMRB Entry 19606

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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