BMRB Entry 19917

Title:
Solution NMR structure of DNA dodecamer containing the 5-hydroxycytosine
Deposition date:
2014-04-17
Original release date:
2014-09-08
Authors:
Donahue, Patrick; Szulik, Marta; Stone, Michael
Citation:

Citation: Szulik, Marta. "Characterization of 5-hydroxycytosine in DNA"  .

Assembly members:

Assembly members:
DNA_(5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OHC)P*GP*CP*G)-3'), polymer, 12 residues, 3355.223 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
DNA_(5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OHC)P*GP*CP*G)-3'): CGCGAATTXGCG

Data sets:
Data typeCount
1H chemical shifts70

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OHC)P*GP*CP*G)-3')_11
2DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OHC)P*GP*CP*G)-3')_21

Entities:

Entity 1, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OHC)P*GP*CP*G)-3')_1 12 residues - 3355.223 Da.

1   DCDGDCDGDADADTDT5OCDG
2   DCDG