BMRB Entry 25869

Name: Solution structure of LptE from Pseudomonas Aerigunosa
Published: 2016-05-23

Click here to enlarge.

PDB ID: 2n8x
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25869
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution structure of LptE from Pseudomonas Aerigunosa

Deposition date:

2015-10-28

Original release date:

2016-05-23

Authors:

Moehle, Kerstin; Kocherla, Harsha; Jurt, Simon; Robinson, John; Zerbe, Oliver; Zerbe, Katja; Bacsa, Bernadette

Citation:

Citation: Moehle, Kerstin; Kocherla, Harsha; Bacsa, Bernadette; Zerbe, Katja; Robinson, John; Zerbe, Oliver. "Solution structure and dynamics of LptE from Pseudomonas aeruginosa" Biochemistry 55, 2936-2943 (2016).
PubMed: 27166502

Assembly members:

Assembly members:
entity, polymer, 166 residues, 18411.617 Da.

Natural source:

Natural source: Common Name: g-proteobacteria Taxonomy ID: 287 Superkingdom: Bacteria Kingdom: not available Genus/species: Pseudomonas aeruginosa

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pCDFduet-1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: GTSGFQLRGLGDAQFALKEI DVSARNAYGPTVRELKETLE NSGVKVTSNAPYHLVLVRED NQQRTVSYTGSARGAEFELT NTINYEIVGANDLVLMSNQV QVQKVYVHDENNLIGSDQEA AQLRSEMRRDLIQQLSMRLQ ALTPAQLDEAQRQAEAKAKA EAEALR

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	587
15N chemical shifts	162
1H chemical shifts	1017

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity	1

Entities:

Entity 1, entity 166 residues - 18411.617 Da.

1

GLY

THR

SER

GLY

PHE

GLN

LEU

ARG

GLY

LEU

2

GLY

ASP

ALA

GLN

PHE

ALA

LEU

LYS

GLU

ILE

3

ASP

VAL

SER

ALA

ARG

ASN

ALA

TYR

GLY

PRO

4

THR

VAL

ARG

GLU

LEU

LYS

GLU

THR

LEU

GLU

5

ASN

SER

GLY

VAL

LYS

VAL

THR

SER

ASN

ALA

6

PRO

TYR

HIS

LEU

VAL

LEU

VAL

ARG

GLU

ASP

7

ASN

GLN

ARG

THR

VAL

SER

TYR

THR

GLY

8

SER

ALA

ARG

GLY

ALA

GLU

PHE

GLU

LEU

THR

9

ASN

THR

ILE

ASN

TYR

GLU

ILE

VAL

GLY

ALA

10

ASN

ASP

LEU

VAL

LEU

MET

SER

ASN

GLN

VAL

11

GLN

VAL

GLN

LYS

VAL

TYR

VAL

HIS

ASP

GLU

12

ASN

LEU

ILE

GLY

SER

ASP

GLN

GLU

ALA

13

ALA

GLN

LEU

ARG

SER

GLU

MET

ARG

ASP

14

LEU

ILE

GLN

LEU

SER

MET

ARG

LEU

GLN

15

ALA

LEU

THR

PRO

ALA

GLN

LEU

ASP

GLU

ALA

16

GLN

ARG

GLN

ALA

GLU

ALA

LYS

ALA

LYS

ALA

17

GLU

ALA

GLU

ALA

LEU

ARG

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_2	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_2	isotropic	sample_conditions_1
3D HNCO	sample_3	isotropic	sample_conditions_1
3D HNCACB	sample_3	isotropic	sample_conditions_1
3D HN(CO)CACB	sample_3	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY aromatic	sample_2	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_2	isotropic	sample_conditions_1

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks

BMRB Entry 25869

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers: