BMRB Entry 30054
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PDB ID: 5j3i
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR30054
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
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Citation: Lan, Wenxian; Hu, Zhongpei; Cao, Chunyang. "Structural investigation into physiological DNA phosphorothioate modification" Sci. Rep. 6, 25737-25737 (2016).
PubMed: 27169778
Assembly members:
DNA (5'-D(*CP*GP*(SSG)P*CP*CP*GP*CP*CP*GP*A)-3'), polymer, 10 residues, 3047.047 Da.
DNA (5'-D(*TP*CP*GP*GP*CP*GP*(SSG)P*CP*CP*G)-3'), polymer, 10 residues, 3078.058 Da.
Natural source: Common Name: high GC Gram+ Taxonomy ID: 1916 Superkingdom: Bacteria Kingdom: not available Genus/species: Streptomyces lividans
Experimental source: Production method: recombinant technology Host organism: Streptomyces lividans
Entity Sequences (FASTA):
DNA (5'-D(*CP*GP*(SSG)P*CP*CP*GP*CP*CP*GP*A)-3'): CGXCCGCCGA
DNA (5'-D(*TP*CP*GP*GP*CP*GP*(SSG)P*CP*CP*G)-3'): TCGGCGXCCG
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 112 |
| 31P chemical shifts | 18 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | entity_1 | 1 |
| 2 | entity_2 | 2 |
Entities:
Entity 1, entity_1 10 residues - 3047.047 Da.
| 1 | DC | DG | GS | DC | DC | DG | DC | DC | DG | DA |
Entity 2, entity_2 10 residues - 3078.058 Da.
| 1 | DT | DC | DG | DG | DC | DG | GS | DC | DC | DG |