BMRB Entry 30533

Name: Solution structure of a c-JUN 5&#039; UTR stem-loop associated with specialized cap-dependent translation initiation
Published: 2020-05-04

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PDB ID: 6mxq
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR30533
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of a c-JUN 5' UTR stem-loop associated with specialized cap-dependent translation initiation

Deposition date:

2018-10-31

Original release date:

2020-05-04

Authors:

Walker, M.; Shortridge, M.; Varani, G.

Citation:

Citation: Walker, M.; Shortridge, M.; Albin, D.; Cominsky, L.; Varani, G.. "Structure of the RNA Specialized Translation Initiation Element that Recruits eIF3 to the 5'-UTR of c-Jun" J. Mol. Biol. 432, 1841-1855 (2020).
PubMed: 31953146

Assembly members:

Assembly members:
entity_1, polymer, 49 residues, 15523.181 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GGCAGUAUAGUCCGAACUGC AACUUCGGUUCACCUUCUCU CUAACUGCC

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	332
15N chemical shifts	14
1H chemical shifts	419

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity_1	1

Entities:

Entity 1, entity_1 49 residues - 15523.181 Da.

1

G

C

A

G

U

A

U

A

G

2

U

C

G

A

C

U

G

C

3

A

C

U

C

G

U

4

C

A

C

U

C

U

C

U

5

C

U

A

C

U

G

C

Name	Sample	Sample state	Sample conditions
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_2	isotropic	sample_conditions_2
2D 1H-1H NOESY	sample_3	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_4	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_5	isotropic	sample_conditions_2
2D 1H-13C HSQC	sample_4	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1

BMRB Entry 30533

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers: