BMRB Entry 6893
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6893
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Bovine Fibrinogen alpha-C Domain PubMed: 16475814
Deposition date: 2005-11-10 Original release date: 2006-04-20
Authors: Burton, R.
Citation: Burton, R.; Tsurupa, G.; Medved, L.; Tjandra, N.. "Identification of an Ordered Compact Structure within the Recombinant Bovine Fibrinogen alphaC-Domain Fragment by NMR" Biochemistry 45, 2257-2266 (2006).
Assembly members:
Fibrinogen alpha chain, polymer, 166 residues, Formula weight is not available
Natural source: Common Name: Cow Taxonomy ID: 9913 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Bos taurus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Fibrinogen alpha chain: MGTFREEGSVSSGTKQEFHT
GKLVTTKGDKELLIDNEKVT
SGHTTTTRRSCSKVITKTVT
NADGRTETTKEVVKSEDGSD
CGDADFDWHHTFPSRGNLDD
FFHRDKDDFFTRSSHEFDGR
TGLAPEFAALGESGSSSSKT
STHSKQFVSSSTTVNRGGSA
IESKHF
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 328 |
| 15N chemical shifts | 118 |
| 1H chemical shifts | 436 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Fibrinogen alpha chain | 1 |
Entities:
Entity 1, Fibrinogen alpha chain 166 residues - Formula weight is not available
| 1 | MET | GLY | THR | PHE | ARG | GLU | GLU | GLY | SER | VAL | ||||
| 2 | SER | SER | GLY | THR | LYS | GLN | GLU | PHE | HIS | THR | ||||
| 3 | GLY | LYS | LEU | VAL | THR | THR | LYS | GLY | ASP | LYS | ||||
| 4 | GLU | LEU | LEU | ILE | ASP | ASN | GLU | LYS | VAL | THR | ||||
| 5 | SER | GLY | HIS | THR | THR | THR | THR | ARG | ARG | SER | ||||
| 6 | CYS | SER | LYS | VAL | ILE | THR | LYS | THR | VAL | THR | ||||
| 7 | ASN | ALA | ASP | GLY | ARG | THR | GLU | THR | THR | LYS | ||||
| 8 | GLU | VAL | VAL | LYS | SER | GLU | ASP | GLY | SER | ASP | ||||
| 9 | CYS | GLY | ASP | ALA | ASP | PHE | ASP | TRP | HIS | HIS | ||||
| 10 | THR | PHE | PRO | SER | ARG | GLY | ASN | LEU | ASP | ASP | ||||
| 11 | PHE | PHE | HIS | ARG | ASP | LYS | ASP | ASP | PHE | PHE | ||||
| 12 | THR | ARG | SER | SER | HIS | GLU | PHE | ASP | GLY | ARG | ||||
| 13 | THR | GLY | LEU | ALA | PRO | GLU | PHE | ALA | ALA | LEU | ||||
| 14 | GLY | GLU | SER | GLY | SER | SER | SER | SER | LYS | THR | ||||
| 15 | SER | THR | HIS | SER | LYS | GLN | PHE | VAL | SER | SER | ||||
| 16 | SER | THR | THR | VAL | ASN | ARG | GLY | GLY | SER | ALA | ||||
| 17 | ILE | GLU | SER | LYS | HIS | PHE |
Samples:
sample_1: Fibrinogen alpha chain, [U-15N; U-13C], 0.2 mM; phosphate buffer 10 mM; NaCl 150 mM; H20 90%; D20 10%
sample_cond_1: ionic strength: 150 mM; pH: 6.0; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| NOESY | not available | not available | not available |
Software:
NMRPipe -
X-PLOR - refinement
NMR spectrometers:
- Bruker DRX 600 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts