BMRB Entry 10109

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PDB ID: 1v5q
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10109
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of the PDZ Domain from Mouse Glutamate Receptor Interacting Protein 1A-L (GRIP1) Homolog

Deposition date:

2007-02-13

Original release date:

2008-08-29

Authors:

Sato, M.; Tochio, N.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Sato, M.; Tochio, N.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.. "Solution Structure of the PDZ Domain from Mouse Glutamate Receptor Interacting Protein 1A-L (GRIP1) Homolog" .

Assembly members:

Assembly members:
Glutamate Receptor Interacting Protein 1A-L Homolog, polymer, 122 residues, Formula weight is not available

Natural source:

Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P030203-74

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Glutamate Receptor Interacting Protein 1A-L Homolog: GSSGSSGAGQVVHTETTEVV LTADPVTGFGIQLQGSVFAT ETLSSPPLISYIEADSPAER CGVLQIGDRVMAINGIPTED STFEEANQLLRDSSITSKVT LEIEFDVAESVIPSSGSGPS SG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	457
15N chemical shifts	111
1H chemical shifts	755

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Glutamate Receptor Interacting Protein 1A-L Homolog	1

Entities:

Entity 1, Glutamate Receptor Interacting Protein 1A-L Homolog 122 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

ALA

GLY

GLN

2

VAL

HIS

THR

GLU

THR

GLU

VAL

3

LEU

THR

ALA

ASP

PRO

VAL

THR

GLY

PHE

GLY

4

ILE

GLN

LEU

GLN

GLY

SER

VAL

PHE

ALA

THR

5

GLU

THR

LEU

SER

PRO

LEU

ILE

SER

6

TYR

ILE

GLU

ALA

ASP

SER

PRO

ALA

GLU

ARG

7

CYS

GLY

VAL

LEU

GLN

ILE

GLY

ASP

ARG

VAL

8

MET

ALA

ILE

ASN

GLY

ILE

PRO

THR

GLU

ASP

9

SER

THR

PHE

GLU

ALA

ASN

GLN

LEU

10

ARG

ASP

SER

ILE

THR

SER

LYS

VAL

THR

11

LEU

GLU

ILE

GLU

PHE

ASP

VAL

ALA

GLU

SER

12

VAL

ILE

PRO

SER

GLY

SER

GLY

PRO

SER

13

SER

GLY

Samples:

sample_1: PDZ domain, [U-13C; U-15N], 0.59 mM; phosphate 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 6.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	isotropic	condition_1
3D 15N-separated NOESY	sample_1	isotropic	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20020425, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.863, Kobayashi, N. - data analysis

CYANA v1.0.7, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1P1E 1V5Q
REF	XP_007506268