BMRB Entry 11047
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR11047
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Citation: Masuda, Tokiha; Ito, Yutaka; Terada, Tohru; Shibata, Takehiko; Mikawa, Tsutomu. "A non-canonical DNA structure enables homologous recombination in various genetic systems." J. Biol. Chem. 284, 30230-30239 (2009).
PubMed: 19729448
Assembly members:
DNA (5'-D(*DTP*DAP*DCP*DG)-3'), polymer, 4 residues, 1231.30 Da.
ttRecO, polymer, 229 residues, Formula weight is not available
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: obtained from a vendor
Entity Sequences (FASTA):
DNA (5'-D(*DTP*DAP*DCP*DG)-3'): TACG
ttRecO: MAPAYTGKVERYRLEEGIVV
GRKPLPQGDLLLRLVTPRGS
LEAVVRKGQRPTGRTGRLSL
FHHVRFQLYAKGEGLPTLTQ
AELLGRLHGLEAPRRFLLAA
FLAELAYRLASPEAAPRIYP
LLVSGLRGIAKHEDPLLPLV
WAGWRVAKAGGIGPNLEGEG
LRLKRGRLGEEGVYLGREGV
EALKATLRLPGAQALPHLEG
APLNRLFLALKAHAEEALGP
LRSAEAIGV
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 37 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 1 | 1 |
| 2 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 2 | 1 |
| 3 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 3 | 1 |
| 4 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 4 | 1 |
| 5 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 5 | 1 |
| 6 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 6 | 1 |
| 7 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 7 | 1 |
| 8 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 8 | 1 |
| 9 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 9 | 1 |
| 10 | DNA (5'-D(*DTP*DAP*DCP*DG)-3') 10 | 1 |
| 11 | ttRecO | 2 |
Entities:
Entity 1, DNA (5'-D(*DTP*DAP*DCP*DG)-3') 1 4 residues - 1231.30 Da.
| 1 | DT | DA | DC | DG |
Entity 2, ttRecO 229 residues - Formula weight is not available
| 1 | MET | ALA | PRO | ALA | TYR | THR | GLY | LYS | VAL | GLU | ||||
| 2 | ARG | TYR | ARG | LEU | GLU | GLU | GLY | ILE | VAL | VAL | ||||
| 3 | GLY | ARG | LYS | PRO | LEU | PRO | GLN | GLY | ASP | LEU | ||||
| 4 | LEU | LEU | ARG | LEU | VAL | THR | PRO | ARG | GLY | SER | ||||
| 5 | LEU | GLU | ALA | VAL | VAL | ARG | LYS | GLY | GLN | ARG | ||||
| 6 | PRO | THR | GLY | ARG | THR | GLY | ARG | LEU | SER | LEU | ||||
| 7 | PHE | HIS | HIS | VAL | ARG | PHE | GLN | LEU | TYR | ALA | ||||
| 8 | LYS | GLY | GLU | GLY | LEU | PRO | THR | LEU | THR | GLN | ||||
| 9 | ALA | GLU | LEU | LEU | GLY | ARG | LEU | HIS | GLY | LEU | ||||
| 10 | GLU | ALA | PRO | ARG | ARG | PHE | LEU | LEU | ALA | ALA | ||||
| 11 | PHE | LEU | ALA | GLU | LEU | ALA | TYR | ARG | LEU | ALA | ||||
| 12 | SER | PRO | GLU | ALA | ALA | PRO | ARG | ILE | TYR | PRO | ||||
| 13 | LEU | LEU | VAL | SER | GLY | LEU | ARG | GLY | ILE | ALA | ||||
| 14 | LYS | HIS | GLU | ASP | PRO | LEU | LEU | PRO | LEU | VAL | ||||
| 15 | TRP | ALA | GLY | TRP | ARG | VAL | ALA | LYS | ALA | GLY | ||||
| 16 | GLY | ILE | GLY | PRO | ASN | LEU | GLU | GLY | GLU | GLY | ||||
| 17 | LEU | ARG | LEU | LYS | ARG | GLY | ARG | LEU | GLY | GLU | ||||
| 18 | GLU | GLY | VAL | TYR | LEU | GLY | ARG | GLU | GLY | VAL | ||||
| 19 | GLU | ALA | LEU | LYS | ALA | THR | LEU | ARG | LEU | PRO | ||||
| 20 | GLY | ALA | GLN | ALA | LEU | PRO | HIS | LEU | GLU | GLY | ||||
| 21 | ALA | PRO | LEU | ASN | ARG | LEU | PHE | LEU | ALA | LEU | ||||
| 22 | LYS | ALA | HIS | ALA | GLU | GLU | ALA | LEU | GLY | PRO | ||||
| 23 | LEU | ARG | SER | ALA | GLU | ALA | ILE | GLY | VAL |
Related Database Links:
| BMRB | 11177 |
| DBJ | BAD70446 |
| GB | AAS80606 AEG33049 AFH39328 EIA39541 |
| REF | WP_008632002 WP_011228077 WP_014510042 WP_014629934 WP_024119227 |